Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04589 ATGAAGGGTAGTTATGCTACTGATTCGAGTAGCAGAGAAGAAAAAAGAAGAAGGGCGAGGTCTTCGTCACCACTGAAGGACCGATCCAGAACCTCTTCGTCTAAGTTATCTTCTTCTTCATCCAAACGAAGTACATCACCCTCTGCCACTCTCCTCGACGTCGATGATGACGTCATCTCTCTCTCACACGATTATCCTAACCCTAACCCTCGGAGCTTCCCTCACAGCGTTAAGCAGAAATGCTGGGAAAAGGCAGACAAGGTCAAAGGACGAGACCCCGACCGCTGGCGCAGGGACGCCCTCGGCAATACTGTCTTTCGCAAGCTCGTAGGTTGCCCTGGTTGTCTCTGTCATGACTACGACCACATTGTCCCTTACTCTAAGGGAGGAGAGAGCACTCTGGAAAACTGTCAAGTATTACAGGCAACAGTTAATCGTTCAAAGGGTAACCGAACAGATATCTCCAAAGCTGAACTTATTCAAAAGAGTTCTTATTGCAGGGTTTCAGATCGTGATATGGATCTTCTTGAACTGTCTGCCTATGGCAATGTCCGGCGTGGACCCGATTCTGGGGGATGTAGAATCCAATGA 591 0.4856 MKGSYATDSSSREEKRRRARSSSPLKDRSRTSSSKLSSSSSKRSTSPSATLLDVDDDVISLSHDYPNPNPRSFPHSVKQKCWEKADKVKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHIVPYSKGGESTLENCQVLQATVNRSKGNRTDISKAELIQKSSYCRVSDRDMDLLELSAYGNVRRGPDSGGCRIQ 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04589 196 MobiDBLite consensus disorder prediction 1 53 - -
Viun3g04589 196 Gene3D - 76 170 - -
Viun3g04589 196 Pfam HNH endonuclease 118 151 IPR002711 GO:0003676|GO:0004519|GO:0008270
Viun3g04589 196 CDD HNHc 105 149 IPR003615 -
Viun3g04589 196 PANTHER HNH ENDONUCLEASE 13 196 - -
Viun3g04589 196 SMART HNH_5 101 146 IPR003615 -
Viun3g04589 196 MobiDBLite consensus disorder prediction 7 25 - -
Viun3g04589 196 MobiDBLite consensus disorder prediction 26 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04589 Viun-Chr3 53498142 53499805 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04589 - - gmx:100500174 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04589 3 53498142 53499805 Viun3g04589 3 53498142 53499805 ECH