Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04585 ATGGACTTCAATCTTGCATTAGTTATTGTGCTAATCACCTTTTTTGGAATTGGTCTTGATGGATGCCATAGCAAGGTTGTGCAGTTCATTTTTGGAGACTCACTCTCTGATGTTGGTAATAACATGCATCTCTCCAGAAGCCTTGCTCAAGCAAGCTTGCCTTGGTATGGCATAGACATGGGAAATGGGTTACCTAATGGAAGGTTCACTAATGGTCGCACAGTAGCTGACATAATAGGTGACCGTACTGGCCTCCCTAGGCCTCCTGCATTCCTGGATCCATCTGTGAGTGAAGAAGTTATACTAGAAAATGGTGTGAACTATGCTTCTGGTGGTGGCGGCATTTTAAATGAAACCGGTGCCTATTTTATCCAAAAGTTTTCCCTGGACAAACAAATTGAGCTATTTCAGGGGACACAAAAGTTAATCAGAGGTAAAATTGGAAAAAGCGCCGCTGACAAGTTTTTCAAGGAAGGTCGTTATGTTGTTGCTTTAGGGAGCAATGACTTTATCAACAACTACTTGATGCCAGTTTACAGAGATTCATGGACATACAATGATGACACATTCCTGGACTACTTAATAGGAACATTGGAAAGACAACTAAAGTTACTTCATAGTTTAGGAGCACGACAGCTGGTGGTTTTCGGGTTGGGTCCAATGGGCTGCATTCCCCTTCAAAGGGTGCTCAGTACAACTGGGAATTGTCGAGAAAAAGCGAACAAACTGGCTCTTAGCTTCAACAAAGGTGTAAGCGAGTTAGTAGATGACTTGGGGAAGCATTTTCCTGATTCAACCTATAGATTTGGAGATGCATATGATGTTGTCAACGATGTGATTAGCAATCCAAACAAGTATGGATTTCAAAACTCAGACTCACCATGTTGTTCCTTTTGGAATATTCGACCCGCCCTTACATGTGTACCTGCATCAAGTCTGTGCAAAGATAGAAGCAAGTATGTCTTCTGGGATGAGTACCACCCCACAGACAGTGCTAATGAGCTTATTGCAGATGAACTCATCAAGAAATTTGGACTTACGAATTCTGATCAAGGGGATGCACCTTCACCAGCTCCTGATGTTGCTCCATCTCCAGAAGACCAATGA 1107 0.4264 MDFNLALVIVLITFFGIGLDGCHSKVVQFIFGDSLSDVGNNMHLSRSLAQASLPWYGIDMGNGLPNGRFTNGRTVADIIGDRTGLPRPPAFLDPSVSEEVILENGVNYASGGGGILNETGAYFIQKFSLDKQIELFQGTQKLIRGKIGKSAADKFFKEGRYVVALGSNDFINNYLMPVYRDSWTYNDDTFLDYLIGTLERQLKLLHSLGARQLVVFGLGPMGCIPLQRVLSTTGNCREKANKLALSFNKGVSELVDDLGKHFPDSTYRFGDAYDVVNDVISNPNKYGFQNSDSPCCSFWNIRPALTCVPASSLCKDRSKYVFWDEYHPTDSANELIADELIKKFGLTNSDQGDAPSPAPDVAPSPEDQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04585 368 Gene3D SGNH hydrolase 27 345 IPR036514 -
Viun3g04585 368 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Viun3g04585 368 MobiDBLite consensus disorder prediction 346 368 - -
Viun3g04585 368 SUPERFAMILY SGNH hydrolase 159 343 - -
Viun3g04585 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 28 343 - -
Viun3g04585 368 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04585 Viun-Chr3 53468223 53470115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04585 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 32.484 3.39e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04585 - - gmx:100815129 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04585 3 53468223 53470115 Viun3g04585 3 53468223 53470115 ECH