Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04573 ATGGTTGGCGACAAGACGAAGAAGTTGAAAATTGCTGAGAATTTGGAAGATACCATCGACGAAAAACTCATCCTCTCCATTGAGAAGTTGCAAGAGGTCCAAGATGAACTCGACAAGATCAATGAGGAGGCGAGTGATAAGGTCCTCGAAGTAGAGCAGAAGTTTAACGAGATAAGGAAGCCAGTTTACGATAAGCGAAATGAGATCATCGTCAAATCTATTCCTGATTTCTGGTTTACTGCTTTTATGAGTCACCCTGCCCTTTGTGAACTTCTGAATTTAGAGGATCAAAAGATATTTAAGTATTTGGGTTCTCTCGAGGTTGAAGATAATAAAGATGTCAAATCTGGTTACTCAATCACCTTTAATTTCAATCCCAATCCATATTTTGAGAATACAAAGCTTACAAAGACTTTTACCTTCTTTGAAGAAGGATCAACAAAGATAACTGCTACCCCCATTAAATGGAAAGAAGGCAAGGGATTACCCAACGGAGTCAATCTTGACAAGAATGGGAAGCGGGGTCGTATTGATATCAGTTTCTTTACTTGGTTTAGTGACTCTGAACAGAAAGAAGATGCGGATGAAATTCATGATGAGGTTGCAGAATTGATCAAAGAAGATTTATGGCCAAATCCACTTACTTATTTCAACAATGAGTTTGACGAAGAGGATTTTGATGATGAAGGTGATGATGAGGAAAAGGATGAGGATGACCAAGAGGATGATGATGATGAGGAGGAAAGCAATGACATTTGA 759 0.3874 MVGDKTKKLKIAENLEDTIDEKLILSIEKLQEVQDELDKINEEASDKVLEVEQKFNEIRKPVYDKRNEIIVKSIPDFWFTAFMSHPALCELLNLEDQKIFKYLGSLEVEDNKDVKSGYSITFNFNPNPYFENTKLTKTFTFFEEGSTKITATPIKWKEGKGLPNGVNLDKNGKRGRIDISFFTWFSDSEQKEDADEIHDEVAELIKEDLWPNPLTYFNNEFDEEDFDDEGDDEEKDEDDQEDDDDEEESNDI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04573 252 Gene3D Nucleosome assembly protein 75 221 - -
Viun3g04573 252 MobiDBLite consensus disorder prediction 220 252 - -
Viun3g04573 252 Gene3D - 3 74 - -
Viun3g04573 252 Coils Coil 23 54 - -
Viun3g04573 252 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 14 236 IPR002164 GO:0005634|GO:0006334
Viun3g04573 252 MobiDBLite consensus disorder prediction 215 252 - -
Viun3g04573 252 SUPERFAMILY NAP-like 13 218 IPR037231 -
Viun3g04573 252 Pfam Nucleosome assembly protein (NAP) 72 219 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04573 Viun-Chr3 53348869 53352686 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04573 K11290 - gmx:100810307 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04573 3 53348869 53352686 Viun3g04573 3 53348869 53352686 ECH