Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04562 ATGACTAAGGTGTTGTTGGTGTTATGTTTTCTCTTGGGGCTTCTGTTCCTTGTTCAGGCTCATGGCAATCATAAGAAAATTGGGTTCTATGAATTGAAGAGAGGAAATTTCAAGCTGAATTTCACAAATTATGGTGCTACAATTCTGTCTGTCGTAACACCTGATAAACACGGGAAACTAGCTGATATTGTTCTTGGCTATGATTCCATTGATTCTTACAAGAATGACACAACTTATTTCGGGGCTCTGATTGGACGAGTGGCCAATAGGATTGGAGGAGCTAAATTCACTTTGGATGGCAAAACCTACCACTTACCCGCAAATGATCACGGGAACACACTTCACGGTGGCACAAGAGGCTTCAGTGACGTTATATGGTCAGTGGAATCCCACAAGAAACACAGTCATGTAACATTTAGCTATCACAGTCACGAAAACGAACAAGGGTTTCCTGGAAAACTTAAAGTCCAAGTGACTTACAAGCTAATAGGAGCACACCAACTGGCTGTGAAAATGATTGCGAAGTCAGTGGATAAAGCCACACCAGTGAATCTTGCGCAGCATACTTACTGGAACCTTGGGGGACACAACAGTGGTGACATTCTTTCTCACAATGTTCAGATCTTTGGTTCATACATCACACCCGTGGACAAGGTTCTCATTCCCACCGGCGAAACCAGATCTGTAAAGGGCACCCCGTATGATTTCCTTGAACCAAAAAAAGTTGTAACCCACATTCGTGAGCTTCCGGATCTATATGATATGAACTATGTGCTGGACAAAAGCTTCCAAAAGCAGTTAAGCAAGGCTGCGGTAGTGAGAGACCCTGTCTCTGGGAGGAACATGGAGCTGTGGTCAAACCAACTCGGTATGCAGTTCTATACTAGTGGCCAGTTGAATGGTACCAAAGGCAAGCATGGGGCCATATACCACAAGTTTGCTGCCATTGCCTTGGAGACACAGGGTTTCCCGGATTCTGTGAATCACCCTTATTTTCCAACACAGATTGTGAAGCCTGGGGAGACTTACGAGCACATCATGCTTTACAGATTCACAGCTAGCTAG 1065 0.4451 MTKVLLVLCFLLGLLFLVQAHGNHKKIGFYELKRGNFKLNFTNYGATILSVVTPDKHGKLADIVLGYDSIDSYKNDTTYFGALIGRVANRIGGAKFTLDGKTYHLPANDHGNTLHGGTRGFSDVIWSVESHKKHSHVTFSYHSHENEQGFPGKLKVQVTYKLIGAHQLAVKMIAKSVDKATPVNLAQHTYWNLGGHNSGDILSHNVQIFGSYITPVDKVLIPTGETRSVKGTPYDFLEPKKVVTHIRELPDLYDMNYVLDKSFQKQLSKAAVVRDPVSGRNMELWSNQLGMQFYTSGQLNGTKGKHGAIYHKFAAIALETQGFPDSVNHPYFPTQIVKPGETYEHIMLYRFTAS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04562 354 CDD galactose_mutarotase_like 30 351 IPR047215 GO:0016853
Viun3g04562 354 Gene3D - 17 353 IPR014718 GO:0030246
Viun3g04562 354 SUPERFAMILY Galactose mutarotase-like 22 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
Viun3g04562 354 PIRSF GALM 17 354 IPR015443 GO:0016853|GO:0019318
Viun3g04562 354 Pfam Aldose 1-epimerase 30 350 IPR008183 GO:0005975|GO:0016853
Viun3g04562 354 PANTHER ALDOSE-1-EPIMERASE 26 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04562 Viun-Chr3 53258393 53260357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04562 25 353 Miscellaneous Gene Families AT3G47800 59.271 2.92e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04562 K01785 - gmx:100806956 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04562 3 53258393 53260357 Viun3g04562 3 53258393 53260357 ECH