Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04546 ATGGATCATCGGCAATGGCGTCCCACTCCACCCCCAAATCTCTGCCCCACTTGCTCCCTCTCCCACTTCCCCTTCTGCCCCGCTCCTCCGCCCCCACCCTATCACCACCCACACCAACCCCCTCTTCCTTACGCCTCCGCCAACCCTAATTTCCAGAATTTCAAGAGACCCCGAATCCACGACAACAACACCCACCCTCTCAATTTCTCCGACGACCAGCGCAGGTTACAGCTCATTCGCGATCACGGAACCAACCCCTCTCTCCCCCACACTCAAAACGCCTTCCATCCACACGACGCCGTTCCGCCGCACCACCGTCACAATGCCCAATTCAGATCTTCCCCGCACCCCTTCCACCCTTATCCTGACCCCTCGCAATGCTTTCCCGACGTTTCCCCCGCCCCTTACCATCACTCCCACGCTCCTCACGTTGGCATGCAGCCACCACCACCGCCTCATGTTAATTTCCCCTCTCACGAAGGGAATCACCACAATCAACACAAGTTGAATGGAAGAGTTGGTCACTATCCTTACCCGTACCCTGCGGGTAACAACAGCAACGGTTCTTCTGATAATAACATGGAAGCTTCTAGATTTCTCAGGGGTCACCCTCAGCCTCCTCTTCCTTCTTCGCCCCCGCCACCTCTTCCTATGGAACCATCCATGAATCAATACAAAACGTACTTTTCACCGCCCAAGAAACCGGCTTCTCTTTTTCCCGTTCAATTGAGCTCATCCCCTTCGTCGTTCTCGCAAGTCCCCGAACCACATTCTTTACCTCAACCCTATCACCCCACCGGTTTTCCTTCCGAGGAACCGTCGAAGCACTACTTGGGAGATTCCCAGCCTTTTTCATTGAACCAGTTTTCTGCCGACAGACCTAAATTTATTGATGCTGCAAATTTATTTCGGCATCCTCATCGGGCTTCGCGGCCTGATCATTTTGTGATAATCTTTCGGGGCCTCCCAGGTAGTGGTAAGAGTTACCTGGCAAAGATGCTGCGTGATCTTGAGGTTGAAAATGGCGGTGATGCACCTCGAATTCATTCTATGGACGATTATTTTATGACTGAGGTTGAAAAGGTTGAGGATAGCGAGGCATCAAAATCTTCAAGTTCAGGCAGAAACAAGAAGCCTGTGACAAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAAGCTTTCAAGAAAACTGTTGAGGAAGGAGTTTTCACCTTCATTATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGCTATGAAGTTTATATTTTAGAAGCTACGTACAAGGACCCAGTGGGTTGTGCTGCTAGGAATGTCCATGGATTTACTCAGGAAGACATAGAGAAGATGTCTAAGCAATGGGAAGAAGCTCCATCCTTGTATCTGCAGCTTGATGTAAAGTCCTTATTTCATGGAGATGATCTAAAGGAAAGCAGGATACAGGAGGTTGACATGGATATGGAAGATGATATGGGAGATGTATTACCTCCAGTTCAAGGAAGAGAAGCTGAGAAAGTTGTTGACCCTACTGTTGAGGAAGATGCGAGTTTCCTGGAAAAGACTGGGAAGAAGTGGGATGCTGAAGGGGAACATCCAACAGAAGTCAGGGAATTGGGTAAAAGCAAATGGTCAGAAGATTTCAGTGAAGATGACATTGGTCAAACGGAAGGTATGAAGGGCAATATTAATGCTCTGTCTGGGTTAATTCATCAATATGGCAAGGAACGAAAATCTGTACATTGGGGTGATCAGGGTGGCAAGACAGGATTTTCAATAGGGGCTGCCAGGAAGGTAAATGCTTTGTCTATAGTGATCGGACCTGGTGCTGGATACAACCTGAAATCGAATCCGTTACCTGAAGAAGATAGTCCAAGTCGTAATAGTGTGGAATCAAAAAAGCATAGCATATTTCAAGAACGAATCCGGGCAGAACGAGAATCCTTCAAAGCGGTCTTTGATAGGAGACGACACAGGATTGGCGGACTTGATGTGGAGGAAGACTAA 2070 0.4826 MDHRQWRPTPPPNLCPTCSLSHFPFCPAPPPPPYHHPHQPPLPYASANPNFQNFKRPRIHDNNTHPLNFSDDQRRLQLIRDHGTNPSLPHTQNAFHPHDAVPPHHRHNAQFRSSPHPFHPYPDPSQCFPDVSPAPYHHSHAPHVGMQPPPPPHVNFPSHEGNHHNQHKLNGRVGHYPYPYPAGNNSNGSSDNNMEASRFLRGHPQPPLPSSPPPPLPMEPSMNQYKTYFSPPKKPASLFPVQLSSSPSSFSQVPEPHSLPQPYHPTGFPSEEPSKHYLGDSQPFSLNQFSADRPKFIDAANLFRHPHRASRPDHFVIIFRGLPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEKVEDSEASKSSSSGRNKKPVTKKVMEYCYEPEMEEAYRSSMLKAFKKTVEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPVGCAARNVHGFTQEDIEKMSKQWEEAPSLYLQLDVKSLFHGDDLKESRIQEVDMDMEDDMGDVLPPVQGREAEKVVDPTVEEDASFLEKTGKKWDAEGEHPTEVRELGKSKWSEDFSEDDIGQTEGMKGNINALSGLIHQYGKERKSVHWGDQGGKTGFSIGAARKVNALSIVIGPGAGYNLKSNPLPEEDSPSRNSVESKKHSIFQERIRAERESFKAVFDRRRHRIGGLDVEED 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04546 689 MobiDBLite consensus disorder prediction 182 196 - -
Viun3g04546 689 MobiDBLite consensus disorder prediction 37 69 - -
Viun3g04546 689 FunFam YLP motif-containing protein 1 isoform X3 315 480 - -
Viun3g04546 689 MobiDBLite consensus disorder prediction 239 282 - -
Viun3g04546 689 MobiDBLite consensus disorder prediction 239 256 - -
Viun3g04546 689 MobiDBLite consensus disorder prediction 205 220 - -
Viun3g04546 689 MobiDBLite consensus disorder prediction 637 658 - -
Viun3g04546 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 314 487 IPR027417 -
Viun3g04546 689 Gene3D - 315 481 IPR027417 -
Viun3g04546 689 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 265 677 IPR026314 GO:0005634
Viun3g04546 689 MobiDBLite consensus disorder prediction 82 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04546 Viun-Chr3 53134931 53143388 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04546 K17602 - gmx:100804293 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04546 3 53134931 53143388 Viun3g04546 3 53134931 53143388 ECH