Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04538 ATGGGAAATCTTTTGTGTTGTGTGCAAGTTGAGCAATCTACAGTGGCTATCAAAGAAAAATTTGGACGATTCGAGGAGGTGCTTCAGCCAGGATGCCATTGCATGCCATGGTTCTTCGGGAAACGACTTGCTGGTCATCTCTCTCTTCGACTACAACAATTGGATCTTCGGTGTGAGACCAAGACAAAGGATAATGTCTTTGTTACTGTTGTTGCTTCAATTCAATACCGTGCCTTGGCAGAGAAGGCCAATGATGCTTTTTACAAACTTAGCAATACAAAGTCCCAAATTCAGGCATATGTTTTTGATGTAATTAGGGCAAGTGTTCCAAAGCTCAACTTGGATGATGCTTTTGAGCAGAAAAATGAAATTGCCAGAGCTGTGGAGGAAGAACTTGAGAAGGCTATGTCAGCTTATGGGTATGAAATTGTTCAAACACTGATTGTTGATATAGACCCAGATGAGCATGTGAAGCGAGCTATGAATGAAATCAATGCTGCTGCAAGATTGAGGGTGGCAGCAAATGAGAAGGCAGAGGCAGAGAAGATCTTGCTAATTAAACGAGCAGAGGGTGAGGCTGAATCTAAATATCTCTCTGGGTTGGGTATTGCTCGCCAACGTCAAGCAATTGTGGATGGATTGAGAGACAGTGTGCTTGGATTCTCGGTCAATGTACCTGGGACGTCTGCAAAAGATGTTATGGACATGGTCCTGGTCACTCAGTATTTTGACACCATGAAAGAAATTGGTGCTGCCTCCAAGTCTTCTGCTGTGTTCATTCCACATGGACCTGGTGCTGTTCGCGATGTTGCTACCCAAATTCGTGATGGCCTTCTTCAGGCTTCTCATCAGTAG 855 0.4409 MGNLLCCVQVEQSTVAIKEKFGRFEEVLQPGCHCMPWFFGKRLAGHLSLRLQQLDLRCETKTKDNVFVTVVASIQYRALAEKANDAFYKLSNTKSQIQAYVFDVIRASVPKLNLDDAFEQKNEIARAVEEELEKAMSAYGYEIVQTLIVDIDPDEHVKRAMNEINAAARLRVAANEKAEAEKILLIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFSVNVPGTSAKDVMDMVLVTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVATQIRDGLLQASHQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04538 284 FunFam Hypersensitive-induced response protein 1 41 167 - -
Viun3g04538 284 Pfam SPFH domain / Band 7 family 9 182 IPR001107 -
Viun3g04538 284 SMART PHB_4 5 165 IPR001107 -
Viun3g04538 284 Gene3D Band 7 domain 44 167 IPR036013 -
Viun3g04538 284 Coils Coil 157 177 - -
Viun3g04538 284 CDD SPFH_like_u4 10 278 - -
Viun3g04538 284 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 5 282 - -
Viun3g04538 284 Coils Coil 114 138 - -
Viun3g04538 284 SUPERFAMILY Band 7/SPFH domain 45 171 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04538 Viun-Chr3 53105918 53110012 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04538 - - gmx:100804982 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04538 3 53105918 53110012 Viun3g04538 3 53105918 53110012 ECH