Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04509 ATGGCACACCACCACCCTTCCCAACATCGGAACTTGGAAGCTCCAAAATCTAAACCTACAACTCCAAACCCAGATCTCATCCAAACCTATAAACCCTCTTTTCTGGTAAAACACATGTCAAGTCTAAACTTGGCTCAAACCCACAAAACCCGTCCACCCCACAAACACTCTCCTATTGTCGACACTCATTTGCAGGGGAAACCTACGACAACCTCTGCTATGGTTGTCCCAGAGAAGGAGAGTGATGTTGTTGTGGCTGTGAAGAGAACCCACAAAGAGAAGTCCCAAAAGCTTAGTTTGGAATTGGAAAGGAGGAAACTTGGTGATTCTAATGACAAGGGTGTGGTTGAGGAAGTTAAGGTTGAAAAGAAGAAACCTGGTTTGGGTTTGGAGAAACATGATGGCGTTGAGAGAATGTCTGTGTCTCTTGCTCCGGGTGGGGGCAGAAGGAGATCCTTCTGTGGGACACAGGCTGATTTAAGAGATGTGTTTGCAATCAATGGGGCGAAAATGGTTTCTGTTGATATGCCACCGTTTATGCAGATCCACGCTGTGAATTGTGCCAGAAATGCTTTGGATAGCATGGAGAAGTTCACATCCAAGACCCTTGCATTCTCCCTCAAAAAGGAATTTGATGGAGTGTATGGGCCGGCATGGCACTGTATTGTGGGGACTAGTTTTGGTTCTTTTGTGACTCATTCCGTTGGAGGTTTTCTATATTTCTCCATGGATCAAAAACTATACATTCTCTTATTTAAAACTGCAGTGCAAAAAGCAGGTTGA 783 0.447 MAHHHPSQHRNLEAPKSKPTTPNPDLIQTYKPSFLVKHMSSLNLAQTHKTRPPHKHSPIVDTHLQGKPTTTSAMVVPEKESDVVVAVKRTHKEKSQKLSLELERRKLGDSNDKGVVEEVKVEKKKPGLGLEKHDGVERMSVSLAPGGGRRRSFCGTQADLRDVFAINGAKMVSVDMPPFMQIHAVNCARNALDSMEKFTSKTLAFSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTAVQKAG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04509 260 MobiDBLite consensus disorder prediction 45 71 - -
Viun3g04509 260 Pfam Dynein light chain type 1 170 254 IPR001372 GO:0007017|GO:0030286
Viun3g04509 260 SMART Dynein_light_2 164 254 IPR001372 GO:0007017|GO:0030286
Viun3g04509 260 MobiDBLite consensus disorder prediction 13 28 - -
Viun3g04509 260 PANTHER DYNEIN LIGHT CHAIN 168 254 IPR001372 GO:0007017|GO:0030286
Viun3g04509 260 SUPERFAMILY DLC 167 254 IPR037177 GO:0007017|GO:0030286
Viun3g04509 260 MobiDBLite consensus disorder prediction 1 28 - -
Viun3g04509 260 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 165 255 IPR037177 GO:0007017|GO:0030286
Viun3g04509 260 FunFam Dynein light chain 158 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04509 Viun-Chr3 52853343 52854930 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04509 - - gmx:100806149 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04509 3 52853343 52854930 Viun3g04509 3 52853343 52854930 ECH