Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04469 ATGGAAAAGAAGCGGAAGAGGAAGCAGCTGGTGCAGGGCGCTGAAGAGACAAAGCCGAAGCCGGTTCGTTCCGGCCCGACCCGAACCGGCACTGTGAAAGATCCGTTCCCATCCCACGGTCGACCCACCCCGCAAGAATGCGTAGCCGTACGAGACACTCTCTTAGCCCTACACGGCATTCCCCCGGAACTCGCAAAGTACCGCAACGCGGTCCAGTCGGAATCACCCGAACCCGTTCTCGACGGTTTGGTCCGAACTGTCCTCTCGCAGAACACCACCGAGACCAATTCCCAAAAGGCCTTCACTTCTCTCAAAACCTCTTTCCCCACTTGGGAACATGTTTTCGTTGCGGAGTCCAAGGACTTGGAGAATGCCATTCGATGCGGAGGTCTGGCCCCGACCAAGGCTTCCTGCATTAAGAACGTGCTGCGCTGTTTGCGCGAGAGAAGAGGTCAATTGTGTTTGGAGTATCTGCGAGATTTATCCGTTGATGAAGTTAAGGCTGAGCTGTCGCTTTTCAAAGGAATTGGTCCCAAAACAGTGTCTTGTGTGTTGATGTTCAATCTTCAGCGAGATGATTTTCCAGTGGACACTCACATATTTGAGATTGCAAAAACCATGGGTTGGGTGCCAGCTGTTGCAGACAGAAATAAGTCGTATCTTCATCTAAACCAACGGATACCAAATGAACTTAAGTTTGACCTAAATTGCCTTATGTATACGCACGGAAAGCTTTGCCGTAAATGCTCCAGTAAAAAGGGTAAGCAGCAAGGAGAAAAAGGGTAG 786 0.5064 MEKKRKRKQLVQGAEETKPKPVRSGPTRTGTVKDPFPSHGRPTPQECVAVRDTLLALHGIPPELAKYRNAVQSESPEPVLDGLVRTVLSQNTTETNSQKAFTSLKTSFPTWEHVFVAESKDLENAIRCGGLAPTKASCIKNVLRCLRERRGQLCLEYLRDLSVDEVKAELSLFKGIGPKTVSCVLMFNLQRDDFPVDTHIFEIAKTMGWVPAVADRNKSYLHLNQRIPNELKFDLNCLMYTHGKLCRKCSSKKGKQQGEKG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04469 261 SMART endo3end 88 245 IPR003265 GO:0006284
Viun3g04469 261 PANTHER - 6 256 - -
Viun3g04469 261 MobiDBLite consensus disorder prediction 1 43 - -
Viun3g04469 261 Pfam HhH-GPD superfamily base excision DNA repair protein 84 225 IPR003265 GO:0006284
Viun3g04469 261 CDD ENDO3c 83 243 IPR003265 GO:0006284
Viun3g04469 261 Gene3D - 72 246 IPR023170 -
Viun3g04469 261 Gene3D Hypothetical protein; domain 2 74 195 - -
Viun3g04469 261 SUPERFAMILY DNA-glycosylase 44 251 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04469 Viun-Chr3 52419440 52423850 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04469 K10773 - gmx:100802952 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04469 3 52419440 52423850 Viun3g04469 3 52419440 52423850 ECH