Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04443 ATGCGATCCTCAACTATGCGATGCTTCACCATCTTCACTCTGTTACTTCTCCTTTCGCAGGGACACGCAACCACCCATAAACTTCTCTCTTCTCCATTTTCAACCGCTCTCGAAACCCTCCAAAAACAACTCGGCTACACCTTCAAGAGCATTGATCTTCTCCGTCGCGCCATGACCCACGCCTCCTTCTCCGAAGAAAACAACAAAGCTTTCGCCATTCTGGGCGCCACCGTCATCGAAACTTCTGTCTCTTTCCACTTACTATCTAAAGACGTTGATATTTCTCCTAAAGAGCTTAACCGTCGAGTGTCCCAAATCACCAACGTCGACTCTTCCTGCGCCGTCGACGGAACTCGATTAGGGTTGCAGAAGATCGTTCGCGTCTCGCCCAAAACCAATTCCTCCGCCCCTGCCGTCGTTTGCGGCGCGTTTCGAGCAATATTCGCTGCCATTTCTATTGACACCGGCAAGTCCGATGATGCAGGTAACGTCTTCTGGAACCTTCATGGCGGCGACCTAGGATCTGCCGTGGCTCTTTGA 540 0.513 MRSSTMRCFTIFTLLLLLSQGHATTHKLLSSPFSTALETLQKQLGYTFKSIDLLRRAMTHASFSEENNKAFAILGATVIETSVSFHLLSKDVDISPKELNRRVSQITNVDSSCAVDGTRLGLQKIVRVSPKTNSSAPAVVCGAFRAIFAAISIDTGKSDDAGNVFWNLHGGDLGSAVAL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04443 179 PANTHER RIBONUCLEASE III 29 156 IPR011907 GO:0003723|GO:0004525|GO:0006364
Viun3g04443 179 Pfam Ribonuclease-III-like 52 158 IPR000999 GO:0004525|GO:0006396
Viun3g04443 179 ProSiteProfiles Ribonuclease III family domain profile. 37 156 IPR000999 GO:0004525|GO:0006396
Viun3g04443 179 SUPERFAMILY RNase III domain-like 31 164 IPR036389 GO:0004525|GO:0006396
Viun3g04443 179 CDD RIBOc 52 159 IPR000999 GO:0004525|GO:0006396
Viun3g04443 179 Gene3D Ribonuclease III domain 35 173 IPR036389 GO:0004525|GO:0006396
Viun3g04443 179 FunFam Protein NUCLEAR FUSION DEFECTIVE 2 35 171 - -
Viun3g04443 179 SMART riboneu5 52 178 IPR000999 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04443 - - gmx:100527745 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04443 3 52248264 52249210 Viun3g04443 3 52248264 52249210 ECH