Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04433 ATGAAGAACTCCGACCCCTCCGCCCACTTCGAATCGCCTCACTCCCCTCTCCGCTTCCGATCCTCCCCGCTCTCCGACAACGGCGACCCCTTCCACTCTCCCGAAAACTCGCCGATAAATGACCACCGAGACAACTCCAGGGCCATCGTCATCATCGAGACTTCCACGCAGTTCGCCCAGACAGCGCCCCCCGCCACCGAGTCCGAGCACCGCAACCCACCGCCCAATGAGCTGCCGGAGGTCGTGGTCACCCGCCCCGCGCGCCCGGAGCCTCGCTCGCCAGCGGCCCCCCGCGGGCGTGCAAGAGCGGCGCCGCCCCCTTCCCTTGCAGTGCCGAAAAGAGAGGTCATGCTGAAAAAGGTGGCGTTAGGATTCCGGTTGAGCGAGGTGGTTTTGTGTCTGATTTCGTTTTCGGTTATGGCCGCGGACAAGACCCGTGGTTGGAGCGGCGACTCTTTTGATCGCTACAAGGAATACAGGTATTGTTTATCGATGAATGTTATCGCGTTTGTATACGCAGCGTTTCAAACCTGTGATCTGGCATATCAAGTAGTGGCAGGGAGAAGCATAATCAGTCACCACCTGCGTTACCACTTTGATTTCTTCATGGATCAGGTTCTGGCGTATCTTCTGATATCGTCTGCATCTTCTGCAGCCACACGCGTTGATGACTGGCAATCGAATTGGGGAAAAGACGACTTCACTGAGATGGCTAGTGCTTCAATTGCGTTGGCCTTTCTTGCTTTCTTTGCCTTTGCTATTAGCTCCTTAATCTCTGGCTACAACCTCTGCACTCTTTTCTCCTAA 807 0.5576 MKNSDPSAHFESPHSPLRFRSSPLSDNGDPFHSPENSPINDHRDNSRAIVIIETSTQFAQTAPPATESEHRNPPPNELPEVVVTRPARPEPRSPAAPRGRARAAPPPSLAVPKREVMLKKVALGFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSMNVIAFVYAAFQTCDLAYQVVAGRSIISHHLRYHFDFFMDQVLAYLLISSASSAATRVDDWQSNWGKDDFTEMASASIALAFLAFFAFAISSLISGYNLCTLFS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04433 268 MobiDBLite consensus disorder prediction 49 67 - -
Viun3g04433 268 Pfam Casparian strip membrane protein domain 118 251 IPR006702 -
Viun3g04433 268 PANTHER CASP-LIKE PROTEIN 4A4 95 264 - -
Viun3g04433 268 MobiDBLite consensus disorder prediction 18 34 - -
Viun3g04433 268 MobiDBLite consensus disorder prediction 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04433 Viun-Chr3 52106687 52108163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04433 - - gmx:100812568 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04433 3 52106687 52108163 Viun9g01198 9 11058891 11060905 ECH
Viun3g04433 3 52106687 52108163 Viun3g04433 3 52106687 52108163 ECH
Viun3g04433 3 52106687 52108163 Viun9g01198 9 11058891 11060905 PCT