Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04407 ATGGCGAACGCGAGTGACGCTGGCGTCGAAGCCCTACGGCGCCTGAAAGCGACGGATCCACCATTATGGTTGGCGCCGAACGCGGAGCTGTCGGAGGCTACTCGTACGGCGTCCCAATACTTGTTTTCTAAACTAAAACCATTTTCCCCTAAAACGCCATTGGACCAACTCCTCGTGGAAGGTTTCGACGCTGAACAGATATGGCAACAAATCGACCTCCAATCACAGCCTCTGTTATCCACCCTGCGCCGCCGTTTGAAGCAGCTGGCTGAAAATCCTGAAGAGATTTTCCAGTTGAAGGTTCCTTCGGAAATTGGGAACAAGGTGGAGGAAAAGAGTACAGACGAGGGGGAGGGAGATAGCGACGGTTTTGACGAGGAGTTGGATGAGGAAGAGGAAGAAGAAGGAGACGAGGACGAAGAAGAGCAGGGAGAAGAAGAAGGAATGGAAGAGGATGAGGAAGATGAAGTGGAAGACGAAGAGGATAATGAAGAAGGCGGTGGCATTGAGGATAAATTCTTGAAAATAGATGAATTGGCGAAGTACTTAGATAAGGAGGAAGAGGATTTTCAGAATGGTGAGGCAGACGGAGAAGGCGAGGAGGAAGATGATGACGAGGAAAGTGATGAGGATGATGATTTTGGGTCTGGTGACGAAGATGATGTAGACGAAGAAGCAGAGGACATGGAAAATGCAAGGTATGAAGACTTCTTTGGAGGTAAAAAGGAAAGGGGCTCAAAAAGAAAAGCTCAAGTACTTCAGGAATCTAAATATTCTGAAGATGAGGATGATATGGAATTTGACAATGAGAAGAAAGGGACTGCATCTGCCCACGAAAAGCAGCTGGAAAAAATTCAATCCAAGATAGAGCAGATGGAGAAAGCTAACATAGAGCCAAAAACATGGACTATGCAGGGTGAGGTAACTGCTGCAAAGAGACCCAAAAATAGTGCATTGGAAGTTGATCTAGACTTTGAGCACAATGTGAGGCCTGCTCCTGTAATCACTGAGGAAGTTACAGCTTCTATCGAGGATATGATCAAGAAGAGGATTATTGAGGGGCTTTTTAATGATGTGCAAAGGCTTTCTAAATTGCCGTCTAAAGCGCCTCGGGAAGTTAAAGAGTTGGATGACAATAAAAGCAAGCAGGGACTTGCAGAAATTTACGAGCAAGAATATGTTCAGAAGACAGACCCCACATCTGCTCCATTGTCATTCAAAGATGAACAAAAGAATGAGGCTAACATGCTGTTTAAGAGACTCTGTCTGAAGCTGGATGCCCTATCTCATTTTAACTTTGCCCCAAAACCTGTTATAGAGGACATGTCTATTCAAGCTAATGTGCCTGCTCTGGCAATGGAAGAAATTGCTCCTGTGGCTGTTTCAGATGCTGCTATGTTGGCTCCTGAGGAGGTGTTTGATGGCAAGGGTGATATCAAGGAAGAAGTAGAGCTTACACAGGCAGAAAGGAAGAGAAGGAGAGCTAACAAGAAAAGAAAATTTAAAGAAGAGGCAGTAAAAAAGACAAAAAAGAAGGCGCAAGAAGGTGCAATTCATAGCCAAGTTAATGGGTAA 1575 0.4502 MANASDAGVEALRRLKATDPPLWLAPNAELSEATRTASQYLFSKLKPFSPKTPLDQLLVEGFDAEQIWQQIDLQSQPLLSTLRRRLKQLAENPEEIFQLKVPSEIGNKVEEKSTDEGEGDSDGFDEELDEEEEEEGDEDEEEQGEEEGMEEDEEDEVEDEEDNEEGGGIEDKFLKIDELAKYLDKEEEDFQNGEADGEGEEEDDDEESDEDDDFGSGDEDDVDEEAEDMENARYEDFFGGKKERGSKRKAQVLQESKYSEDEDDMEFDNEKKGTASAHEKQLEKIQSKIEQMEKANIEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDMIKKRIIEGLFNDVQRLSKLPSKAPREVKELDDNKSKQGLAEIYEQEYVQKTDPTSAPLSFKDEQKNEANMLFKRLCLKLDALSHFNFAPKPVIEDMSIQANVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDIKEEVELTQAERKRRRANKKRKFKEEAVKKTKKKAQEGAIHSQVNG 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04407 524 Coils Coil 275 298 - -
Viun3g04407 524 MobiDBLite consensus disorder prediction 116 167 - -
Viun3g04407 524 MobiDBLite consensus disorder prediction 232 258 - -
Viun3g04407 524 MobiDBLite consensus disorder prediction 168 188 - -
Viun3g04407 524 MobiDBLite consensus disorder prediction 492 506 - -
Viun3g04407 524 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 5 514 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Viun3g04407 524 MobiDBLite consensus disorder prediction 485 524 - -
Viun3g04407 524 MobiDBLite consensus disorder prediction 93 278 - -
Viun3g04407 524 Pfam Mpp10 protein 49 509 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Viun3g04407 524 PIRSF snoRNP_Mpp10 223 522 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Viun3g04407 524 PIRSF snoRNP_Mpp10 2 273 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Viun3g04407 524 MobiDBLite consensus disorder prediction 189 231 - -
Viun3g04407 524 Coils Coil 485 512 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04407 K14559 - gmx:100781093 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04407 3 51879459 51884835 Viun3g04407 3 51879459 51884835 ECH