Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04395 ATGAAGAAGGGAATAACACTACTAACCATAACAGCGATCGCGACATGTTTGGCTATGGTTAGCAGTGCGCCGGAGTCCCCACCGTACACTGTGGTGCACTCGCAGTCCGATTTCGAGATCAGACTCTATGGAACCTCCGTTTGGATGTCTGCTCCCGCTCTCGACATTTCCTTCGAGAAAGCCACGTGGGACGGTTTTCACAGGTTGTTCCAGTTTACAGAAGGCGCCAACCTCAATTTCTCGCGAATCCCAATGACCGTTCCCGTCTTGACCACCACCGTCCCCGGAGCCGGTCCTCTTCAGTCCCAAGGCTACTACGTTAGTTTATACTTACCCGTTAAGTTCCAAGGAAACCCACCACTGCCGCTTCCAGAACTCAATATCAGGCCCTATGAGTTCACCACCCACTGCGTTGCGGTTAGAAAGTTCTCTGGATTCGCCAATGATGAGAGGATTGTCAAGGAGGCGGAAAAGCTCGCCACCAGCCTCAGTCGCTCTCCCTGGGCGCAGTCCAAGACTCGCCGTGGTTACTCGATCGCGCAGTACAACACTCCCATCCGAATTGTGAATCGCAAAAACGAGGTCTGGGTGGACATCGATGCTCCCCAATCAGGCTGTGAATCGGTTGGTGTTTCCGCGTATTGA 645 0.5318 MKKGITLLTITAIATCLAMVSSAPESPPYTVVHSQSDFEIRLYGTSVWMSAPALDISFEKATWDGFHRLFQFTEGANLNFSRIPMTVPVLTTTVPGAGPLQSQGYYVSLYLPVKFQGNPPLPLPELNIRPYEFTTHCVAVRKFSGFANDERIVKEAEKLATSLSRSPWAQSKTRRGYSIAQYNTPIRIVNRKNEVWVDIDAPQSGCESVGVSAY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04395 214 PANTHER HEME-BINDING PROTEIN-RELATED 21 200 IPR006917 -
Viun3g04395 214 Gene3D Regulatory factor, effector binding domain 24 206 IPR011256 -
Viun3g04395 214 Pfam SOUL heme-binding protein 25 197 IPR006917 -
Viun3g04395 214 SUPERFAMILY Probable bacterial effector-binding domain 15 199 IPR011256 -
Viun3g04395 214 FunFam Heme-binding protein 2 24 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04395 Viun-Chr3 51799737 51800817 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04395 - - gmx:100306073 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04395 3 51799737 51800817 Viun3g04395 3 51799737 51800817 ECH