Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04375 ATGACAAGCAGCAGCACTTTACTTGCTGCTATTCTGAAACTTCTCATCATTTTCTTATTCGCAGGTTGGGTTGTTCTTTGGCTTCTGAAGCCCACCCAAATATGGACAAGAAAATGGAAACAATTAGAAGATAGCGCTAATAATACAATTTTTGGATACTATGGTCTTAGCTTCGCTGTGTACACGTTTCCTGTAATTGCTATTGCAATAATTGGACTTCTTTTATTGGATTTAAAAGCTGGATACCAAAGCAGAAGTGCAAGAAGTCCATCAGAAACGAACTTCTTCTCAAATCCGCTGGTAGTGAACAGCACACTGGGAATCTTATCCAGTATTGAAATACTGGCAGCTTTCCTTTTTATTGTCTTCTTAGCATGGACCTACTACTCTCGTATTTCTTCAGACTTCAAAAAGTTGGTGCCATACAAATCACTGAAGTTGAATACATGGCAACTCAAGTATCACAGAGTAGCAACCCGGTTTGGCTTGCTATCAGAAGCTTGTCTTGCTTTGTTGCTCCTCCCTATTTTAAGAGGGTTGGCAGTGTTTCGCATACTTGGCATTCAGTTTGAAGCTTCAGTTAGATATCACACCTGGGTCGGAACTGCAATGATACTATTTGCTACAATACATGGTGCAAGTACTTTGTTGGTATGGGGGGTCAGCCACCATATTCAGGATGAGATTTGGAAGTGGCAGAAGACTGGACGCATATACCTCGCTGGGGAGATAGCACTTCTTGTGGGGCTAGTCATTTGGGTCACTTCTCTTCCCCAAATTAGAAGGAGAAAGTTTGAAATCTTCTACTACACGCATCATTTCTATGTGATATTTCTTGTATTTTTCTTATTTCACGGTGGGGATAGGCACTTTTATACGGTTTTCCCAGGGATATTCCTTTTTAGCCTTGATAAATTGATACGAATCATACAATCAAGTCCAAAAACTTGCATGGTTTCAGCTAGAATTTTTCCTGGCAAAGCTGTGGAGCTAATTCTGCCCAAAGATCCAGGGCTGAAATATAACCCCACAAGTGTTATATTTTTGAAGATACCAACCATATCTCATCTTCAATGGCACTCTTTCAGTATAATATCTAGTTCCAGGGCTGATAACCACATTTTGTCAGTGATAGTAAAATGTGAAGGGTGGTGGACTAATTCTCTTTACGACCTGATAAATGCTGAACTAGACAAAACTGAAGATAAAAGGAAGGGAATACCTGTTGCAATCGAAGGACCTTATGGACCTGCTTCTTTGGACTTTTTGAGATATGACACCCTTCTTCTGGTTGCTGGAGGAAGTGGAATAACCCCATTTCTGAGCATTTTGACAGAAGCTAATTCAGCTGCCAGCAAAAGTAGATTTCCCTCGAGAATACATCTTGTGCATGTCATCAAGAAAGCACAAGACTTCTGTCTGTTACAGTCAATCTCACATCTGTTACTCGACCAATCAACTAAAAGTTTTCATTTGAACCTAAAGTTGTTTATAACCCGAGAAACACAAACAGGGGTAGGAATGAGGGAGCTACTAAATGAGTTCTCTAAAGCAAGAACCCTGCGAGTGAACAGCGTGTGTTCAAATTATGCGGCATACGGGCCTGAAAGTCCGTCTTGGATGGCTGCCATTGCTGGATTTTGCTCCATTACTTTTCTAATTTTCCTAATCTGCTTCAACCATATTATAATTCCATCTGGAAAGCGCTCCAAAATGGCCAAAGAAAAGACTCCCTCTTGGGTCGTGGATCTTCTTCTGATAGCTGCTTTTGTCCTTGCTTTAGCCTGCAGCGCCTCGGTGGCAGGCTTTTTGAGATGGAGAAGGCTGAGGAAAGGGATTCCTCAAATCTCGCATAGAGAAATTGAAGCCCTTGATCTATATTCAGATGAAGCTAGAAATGCACTTGAAGCACACGAGGTGTATTTTGGGGGAAGGCCTAACTTTAAAGAAATATTTGGCAAGCTCCGAAATGAAAGCGATGGATCTAATATTGGAGTATTGGTTTGTGGACCTGAGAGCATGAAGGAATCGGTGGCGCTCGCATGCCAGCAGGAATCAGAGTGTTTTAATGCAAAGAGAACAGAATCCTGCTTCACTTTCCACACTCTCAACTTCACGCTTTAG 2124 0.4148 MTSSSTLLAAILKLLIIFLFAGWVVLWLLKPTQIWTRKWKQLEDSANNTIFGYYGLSFAVYTFPVIAIAIIGLLLLDLKAGYQSRSARSPSETNFFSNPLVVNSTLGILSSIEILAAFLFIVFLAWTYYSRISSDFKKLVPYKSLKLNTWQLKYHRVATRFGLLSEACLALLLLPILRGLAVFRILGIQFEASVRYHTWVGTAMILFATIHGASTLLVWGVSHHIQDEIWKWQKTGRIYLAGEIALLVGLVIWVTSLPQIRRRKFEIFYYTHHFYVIFLVFFLFHGGDRHFYTVFPGIFLFSLDKLIRIIQSSPKTCMVSARIFPGKAVELILPKDPGLKYNPTSVIFLKIPTISHLQWHSFSIISSSRADNHILSVIVKCEGWWTNSLYDLINAELDKTEDKRKGIPVAIEGPYGPASLDFLRYDTLLLVAGGSGITPFLSILTEANSAASKSRFPSRIHLVHVIKKAQDFCLLQSISHLLLDQSTKSFHLNLKLFITRETQTGVGMRELLNEFSKARTLRVNSVCSNYAAYGPESPSWMAAIAGFCSITFLIFLICFNHIIIPSGKRSKMAKEKTPSWVVDLLLIAAFVLALACSASVAGFLRWRRLRKGIPQISHREIEALDLYSDEARNALEAHEVYFGGRPNFKEIFGKLRNESDGSNIGVLVCGPESMKESVALACQQESECFNAKRTESCFTFHTLNFTL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04375 707 Pfam Ferric reductase NAD binding domain 425 682 IPR013121 GO:0016491
Viun3g04375 707 CDD NOX_Duox_like_FAD_NADP 319 500 - -
Viun3g04375 707 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 296 421 IPR017927 GO:0016491
Viun3g04375 707 Gene3D - 409 547 IPR039261 -
Viun3g04375 707 Gene3D - 607 705 IPR039261 -
Viun3g04375 707 SFLD Ferric Reductase Domain 32 705 - -
Viun3g04375 707 PRINTS Cytochrome B-245 heavy chain signature 240 263 IPR000778 GO:0016020|GO:0016491
Viun3g04375 707 PRINTS Cytochrome B-245 heavy chain signature 265 285 IPR000778 GO:0016020|GO:0016491
Viun3g04375 707 Pfam Ferric reductase like transmembrane component 162 282 IPR013130 -
Viun3g04375 707 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 409 511 IPR039261 -
Viun3g04375 707 SUPERFAMILY Riboflavin synthase domain-like 319 417 IPR017938 -
Viun3g04375 707 Pfam FAD-binding domain 319 419 IPR013112 GO:0016491
Viun3g04375 707 SFLD Ferric reductase subgroup (FRE) 9 705 - -
Viun3g04375 707 PANTHER NADPH OXIDASE 15 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04375 Viun-Chr3 51498668 51501701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04375 182 707 Miscellaneous Gene Families AT5G50160 46.931 1.41e-175 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04375 K00521 - gmx:100816560 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04375 3 51498668 51501701 Viun3g04375 3 51498668 51501701 ECH