Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04341 ATGGAGCAATACTGGTCTGGAAGTGCCCTCAACGAGAACAAAGGAATGGTAGATAATTTGCAGCGTTATGGAATTATTACTTCCAGAAAGGTGGGTGAAGTAATGGAAACCATTGATAGAGCTTTGTTTGTGCCTGGTGGACTTCAACCTTATGTTGACAGTCCTATGCCGATTGGCTACAATGCTACTATATCTGCACCACATATGCATGCAACGTGCCTTCAGTTGCTGGAGAAGAATTTGCAGCCTGGGATGCGTGCTCTGGACGTTGGCTCTGGAACGGGATACCTCACTGGATGCTTTGCCTTGATGGTAGGACCTCAAGGCCGTGCTGTTGGCGTGGAACATATTCCTGAATTGGTTTCTTTTTCAATTGAGAATATTAAAAAAAGTGCTGCAGCTCTACCACTGAAAGATGGTTCCCTTTCTGTGCATTGTTGTGTGATTGTTGTGTTGACAGATGGGAGGCAAGGTTGGCCTGATTTTGCTCCTTATGAAGCCATTCATGTGGGAGCAGCGGCACCAGAAATTCCTCAACCACTTATTGATCAGTTGAAGCCGGGTGGTAGAATGGTTATTCCTGTTGGAAACATATTTCAAGATTTAAAGGTCGTGGATAAGAACTCTGATGGTTCTATCAGTATCCGGACTGAGACTTCTGTTCGGTATGTGCCTCTCACTAGCAGAGAAGCTCAGTTGCGTGGTTAG 708 0.4534 MEQYWSGSALNENKGMVDNLQRYGIITSRKVGEVMETIDRALFVPGGLQPYVDSPMPIGYNATISAPHMHATCLQLLEKNLQPGMRALDVGSGTGYLTGCFALMVGPQGRAVGVEHIPELVSFSIENIKKSAAALPLKDGSLSVHCCVIVVLTDGRQGWPDFAPYEAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISIRTETSVRYVPLTSREAQLRG 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04341 235 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 5 233 IPR000682 GO:0004719|GO:0036211
Viun3g04341 235 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 230 - -
Viun3g04341 235 NCBIfam protein-L-isoaspartate O-methyltransferase 12 232 IPR000682 GO:0004719|GO:0036211
Viun3g04341 235 CDD AdoMet_MTases 86 195 - -
Viun3g04341 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 204 IPR029063 -
Viun3g04341 235 Gene3D Vaccinia Virus protein VP39 9 232 IPR029063 -
Viun3g04341 235 FunFam Protein-L-isoaspartate O-methyltransferase 4 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04341 Viun-Chr3 51227984 51230576 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04341 K00573 - gmx:100527082 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04341 3 51227984 51230576 Viun3g04341 3 51227984 51230576 ECH
Viun3g04341 3 51227984 51230576 Viun9g01390 9 14553528 14555960 PCT