Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04320 ATGGAAGTTGTGTGTGGAAGGGGGGTTTGCGTCTCATCTCTTCCGCGCTCATCAACGCTTACCAAAAGCTCCGTTCCTCAATCCCGAGTCAGTTACCAACACCTAACACCATTTCCTTCACAATCTCATCTATTCTCCTATCACCCTCCGCCCTATGCTAAAACCCTCCGCGCCAGAACCACCACCAAACCCGCTATTTTCCTTCCACACTTAGTTGCTTCTCTGCAACAAGTTGACCAGACTTACATAATGGTGAAGCCCGACGGCGTGCAACGTGGCCTCGAGCATTACAAGGACCTAAAGCAAAAGTCATTCTTCCCTAAGCTCATTGACTATATTACTTCTGGTCCTGTTGTTAGTATGGCTTGGGAGGGTGTTGGAGTAGTGGCATCCGCACGTAAGCTTATAGGGGCTACTGATCCTCTTCAAGCTGAACCAGGCACAATTAGAGGAGACCTTGCTGTTCAAACAGGAAGGAATGTTGTTCATGGCAGTGACAGTCCCGAAAATGGCAAGCGTGAAATAGCTCTATGGTTCAAGGAAGGCGAATTATGCGATTGGATCCCCGTTCAGGCACCATGGCTGAGAGAATAA 594 0.4865 MEVVCGRGVCVSSLPRSSTLTKSSVPQSRVSYQHLTPFPSQSHLFSYHPPPYAKTLRARTTTKPAIFLPHLVASLQQVDQTYIMVKPDGVQRGLEHYKDLKQKSFFPKLIDYITSGPVVSMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIALWFKEGELCDWIPVQAPWLRE 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04320 197 PRINTS Nucleoside diphosphate kinase signature 116 133 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Viun3g04320 197 PRINTS Nucleoside diphosphate kinase signature 160 179 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Viun3g04320 197 PRINTS Nucleoside diphosphate kinase signature 137 153 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Viun3g04320 197 PRINTS Nucleoside diphosphate kinase signature 96 115 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Viun3g04320 197 Gene3D - 74 197 IPR036850 -
Viun3g04320 197 SMART ndk_5 78 186 IPR034907 -
Viun3g04320 197 ProSitePatterns Nucleoside diphosphate kinases active site. 160 168 IPR023005 -
Viun3g04320 197 FunFam Nucleoside diphosphate kinase 93 193 - -
Viun3g04320 197 CDD NDPk_I 80 179 - -
Viun3g04320 197 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 95 196 - -
Viun3g04320 197 SUPERFAMILY Nucleoside diphosphate kinase, NDK 78 195 IPR036850 -
Viun3g04320 197 Pfam Nucleoside diphosphate kinase 95 183 IPR034907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04320 Viun-Chr3 51003727 51007780 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04320 K00940 - gmx:100500478 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04320 3 51003727 51007780 Viun3g04320 3 51003727 51007780 ECH