Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04309 ATGTCGAACACTAACTTGGAAGATGTTCCCTCTCTGGATCTCATGACTGAGCTCCTTCGTCGCTTCAAGTGCTCCTCCAAACCTGACAAGCGCCTTATTCTCATTGGCCCACCTGGATCTGGTAAAGGTACCCAGTCGCCAATCATAAAGGATGAGTACTGCTTATGCCACTTAGCTACTGGTGATATGTTAAGAGCAGCTGTAGCTGCCAAGACCCCTCTTGGTGTTAAGGCTAAAGAAGCTATGGATAAGGGAGAACTTGTTTCTGATGACTTGGTTGTTGGGATTATAGATGAAGCAATGAAAAAACCATCATGTCAGAAAGGTTTCATTCTTGATGGTTTCCCAAGAACTGTGGTCCAAGCACAGAAGCTTGATGAGATGCTGGATAAGCAGGGGGTGAAAGTTGATAAGGTGCTCAATTTTGCAATTGACGATTCAGTCCTTGAGGAGCGAATTACTGGTCGCTGGATACACCCATCTAGTGGCAGAACATACCACACAAAATTTGCCCCTCCTAAGGTTGCGGGGGTTGATGATGTTACGGGCGAACCACTTATCCAGCGTAAGGATGACACTGCAGCTGTTCTGAAGTCAAGACTGGAGGCATTTCATAGGCAAACTGAGCCCGTTATTGACTACTATTCGAAGAAGGGCGTAGTTGCTAATCTTCATGCTGAGAAACCTCCCAAAGAGGTGACAGTTGAAGTAGAGAAAGTGCTGTCTTAG 729 0.4595 MSNTNLEDVPSLDLMTELLRRFKCSSKPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLDKQGVKVDKVLNFAIDDSVLEERITGRWIHPSSGRTYHTKFAPPKVAGVDDVTGEPLIQRKDDTAAVLKSRLEAFHRQTEPVIDYYSKKGVVANLHAEKPPKEVTVEVEKVLS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04309 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 239 IPR027417 -
Viun3g04309 242 NCBIfam adenylate kinase 31 241 IPR006259 GO:0004017|GO:0005524|GO:0016776
Viun3g04309 242 Pfam Adenylate kinase, active site lid 156 191 IPR007862 GO:0004017
Viun3g04309 242 CDD ADK 31 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Viun3g04309 242 FunFam Adenylate kinase mitochondrial 30 242 - -
Viun3g04309 242 PANTHER NUCLEOTIDE KINASE 7 237 IPR000850 GO:0005524|GO:0006139|GO:0019205
Viun3g04309 242 Hamap Adenylate kinase [adk]. 30 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Viun3g04309 242 PRINTS Adenylate kinase signature 61 75 IPR000850 GO:0005524|GO:0006139|GO:0019205
Viun3g04309 242 PRINTS Adenylate kinase signature 206 220 IPR000850 GO:0005524|GO:0006139|GO:0019205
Viun3g04309 242 PRINTS Adenylate kinase signature 110 126 IPR000850 GO:0005524|GO:0006139|GO:0019205
Viun3g04309 242 PRINTS Adenylate kinase signature 189 204 IPR000850 GO:0005524|GO:0006139|GO:0019205
Viun3g04309 242 PRINTS Adenylate kinase signature 33 46 IPR000850 GO:0005524|GO:0006139|GO:0019205
Viun3g04309 242 ProSitePatterns Adenylate kinase signature. 110 121 IPR033690 -
Viun3g04309 242 Pfam Adenylate kinase 34 219 - -
Viun3g04309 242 Gene3D - 2 242 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04309 Viun-Chr3 50881097 50884770 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04309 K00939 - gmx:100791848 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04309 3 50881097 50884770 Viun3g04309 3 50881097 50884770 ECH