Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04284 ATGGAGGTCGAACTCAAACAGTTGAACGCCGATCTTCAATTTCTGAGCCAATCGCTTCCCGATCCATCTCATCATGCTTTGCTCCGCAAGATTCAATTGCGTGTTGAGGACCTTGGCAAGCTTGCAGCGGCTGCACCTGTTCATCGCTCCAAAGTTGAGGATATGAGTGCTGAGGTTGTAGATAGCAATCCTTATAGTCGGCTTATGGCACTTCAGAGAATGGGTATTGTGGAGAACTATGAAAGAATACGCGATTTCTCCGTTGCCATAGTTGGGATTGGTGGTGTAGGAAGTGTTGCAGCTGAGATGCTGACTAGATGCGGCATAGGTCGACTTTTGTTGTATGATTATGACAAAGTGGAGCTTGCAAACATGAATAGGTTGTTCTTTCGTCCAGATCAGGTTGGTTTGACTAAGACTGATGCAGCTGTACAGACTCTTTCAGACATAAACCCTGATGTTGTACTAGAGAGCTATACACTGAATATCACAACCGTCACAGGTTTTGAAACCTTTATGTCAAGTTTGAAAAAAAAATCATTTCGCCCAAATAAAGAAGGGAGCGGCGTGGATCTGGTTTTAAGTTGTGTGGATAATTACGAAGCAAGAATGGCTGTTAACCAGGCCTGTAATGAATTGAGTCAAACATGGATGGAGTCAGGTGTTTCTGAGGATGCTGTTTCTGGCCATATTCAACTACTTATTCCTGGTGAAACTGCCTGTTTTGCTTGTGCACCTCCTCTGGTTGTTGCATCTGGGGTAGATGAACGCACACTCAAGCGCGAAGGGGTCTGTGCCGCATCATTACCCACCACTATGGGGGTTGTTGCTGGCCTTCTAGTCCAAAACACACTAAAATTATTGTTAGGCTTTGGACAAGTCTCTCCATATTTGGGATATAATTCTCTTAAGGATTTTTTTCCAACTATGCAAATGAGGCCAAACCCTCAATGTTCAAATGTTGCTTGCCTGAAAAGACAGGAAGAATACATGCTTGCAAAACCAGCAAGAGATGCTGCAGCCAAAGCAAAAATGGAAGCTGAAGTACTATCAATTGAGGAAGTGCCACTTCACGACGATAATGAATGGAATATAAGTGTTGTTAATGATGTTGAGCTGGACGGTCCGGATACCAGAAGTTCAGATGTTCTGCCGGAAGGTCTCACGCATGAACTTCCTAGTGCAGACGAGTTTCACAAGGCAATTTCTGACGCGCCAGTGGCTGACAACGACGACCTTGAAGATCTTCGTAGGCAACTTGAAGCCATTAATTCTGCATAG 1281 0.4434 MEVELKQLNADLQFLSQSLPDPSHHALLRKIQLRVEDLGKLAAAAPVHRSKVEDMSAEVVDSNPYSRLMALQRMGIVENYERIRDFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGLTKTDAAVQTLSDINPDVVLESYTLNITTVTGFETFMSSLKKKSFRPNKEGSGVDLVLSCVDNYEARMAVNQACNELSQTWMESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGVDERTLKREGVCAASLPTTMGVVAGLLVQNTLKLLLGFGQVSPYLGYNSLKDFFPTMQMRPNPQCSNVACLKRQEEYMLAKPARDAAAKAKMEAEVLSIEEVPLHDDNEWNISVVNDVELDGPDTRSSDVLPEGLTHELPSADEFHKAISDAPVADNDDLEDLRRQLEAINSA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04284 426 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 60 324 IPR035985 GO:0008641
Viun3g04284 426 FunFam Putative ubiquitin-like modifier-activating enzyme 5 82 344 - -
Viun3g04284 426 Pfam ThiF family 65 319 IPR000594 -
Viun3g04284 426 CDD ThiF_MoeB_HesA_family 64 312 - -
Viun3g04284 426 Gene3D - 82 344 - -
Viun3g04284 426 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 45 419 IPR045886 -
Viun3g04284 426 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04284 Viun-Chr3 50580157 50585687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04284 60 175 EF-hand Containing Proteins AT2G30110 33.613 2.59e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04284 K12164 - gmx:100819760 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04284 3 50580157 50585687 Viun3g04284 3 50580157 50585687 ECH