Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04260 ATGGCTCTCTGCTGCTCCACCTTCTTTTTTGCTGCTCTTTCTTCGATTCTTTTCTCGGCTCAACTCTGTCTTTCCCAAAAAGTTCCCAACTACACATTCATGCGCAATGCAACGACGGCACCAGACATCTCCTTCTACGACTACATCGTAATTGGCGGCGGCACAGCAGGTTGTCCTCTCGCTGCGACACTGTCCCAGAATTACAGCGTGTTGCTCCTTGAACGCGGTGGCTCACCCTACGGCAACCCCAACATCAGCAACTTAGCAGCCTTCGGTGCTGCCCTCTCCGACACCTCCCCCACCTCTCCCGCTCAACGCTTCGTCTCCGAAGACGGAGTGATCAACTCAAGAGCCCGCATCCTCGGCGGCGGAAGCTGCTTGAACGCTGGGTTTTACACTCGCGCCAGCCCTGAATACGCAAGGGAAGCGGGGTGGGATGGGAGGGCGGTGAATGAGTCGTACGAATGGGTGGAGAAGGTAGTGGCGTTTGAGCCAGAAGTGAAGCAGTGGCAGTCAGCTGTTCGGGAAGGACTCCTTGAGATAGGTGTTGTGCCTAATAACGGCTTCACCTATGATCACATTGGTGGGACTAAGGTAGGTGGCACCATCTTTGACCACCAAGGCTTCAGACACACCGCCGCTGATCTTTTGCAATATGCCAACCCCTCTGCAATTACCCTCCTTCTCCATGCCACCGTCCACAGGATCCTCTTTCGAGTCAAAGATGGATCAAAACCAATGGCGCATGGAGTAATCTTCAGAGATTCATTGGGTCGTAAACACAGGGCGTACCTGAATCGCCATCCCAAGAGCGAGATCATTGTTTCGGCTGGTGCTCTTGGGAGCCCACAACTTCTAATGTTGAGTGGAGTTGGGCCTAAAGAACACCTTCGGGCCCATAACATCAGTGTAACATTGGACCAGCCCTTGGTCGGTCAGGGAATGTCGGATAATCCCATGAACGCCATCTTTATCCCATCTCCTCAACCGGTGGAGATATCTCTGATTGAGGTGGTGGGCATCACCAGTTTTGGCAGTTACATCGAAGCTGCCAGTGGTGAAAACTTCGGTGGTGGTGGTTCCCCGAAGGACTACGGGATGTTCTCTCCGAAGATTGGTCAACTGTCGAGGGTGCCGCCAAAGGAAAGGACCCAGGAGGCCATTGATAAGGCAATAGAAGCGATGGAGGGTCTGGACCAAGCAGCCTTCAGAGGAGGGTTCATCCTGGAGAAGATAATGGGTCCGATTTCAAGCGGGCATTTGGAGCTCCGAAGCCGCGATCCAAACGAGAACCCGTCGGTGACCTTCAACTACTTCCAGGATCCCCAGGACCTGGAGAGATGCGTGCAGGGTCTTCGCACGGTGGAGAAGATAATCGAATCGAAGGCATTCAGTCCCTTCAGATACCCCAACTTGCCAATCCCCGTGCTTCTGAACATGACCGCAAATTCCCCCGTTAACTTGCTCCCCAAACACACCAATTCCTCCCTCTCTCTCCAACAGTTCTGCAGAGACACTGTGATGACCATTTGGCACTACCACGGAGGCTGCCAAGTTGGGAAAGTCGTCGACAGGGACTACAAGGTTCTTGGTGTCGATGCACTTCGCGTTATCGATGGTTCCACCTTTAACTACTCCCCTGGGACTAACCCTCAGGCCACTGTTATGATGCTTGGCAGGTACATGGGAGTTAAAATACTCACTCAGAGACTTCGTGCCACTTCTGCGGATCAAACACACCAACAAATTGTATAG 1755 0.5299 MALCCSTFFFAALSSILFSAQLCLSQKVPNYTFMRNATTAPDISFYDYIVIGGGTAGCPLAATLSQNYSVLLLERGGSPYGNPNISNLAAFGAALSDTSPTSPAQRFVSEDGVINSRARILGGGSCLNAGFYTRASPEYAREAGWDGRAVNESYEWVEKVVAFEPEVKQWQSAVREGLLEIGVVPNNGFTYDHIGGTKVGGTIFDHQGFRHTAADLLQYANPSAITLLLHATVHRILFRVKDGSKPMAHGVIFRDSLGRKHRAYLNRHPKSEIIVSAGALGSPQLLMLSGVGPKEHLRAHNISVTLDQPLVGQGMSDNPMNAIFIPSPQPVEISLIEVVGITSFGSYIEAASGENFGGGGSPKDYGMFSPKIGQLSRVPPKERTQEAIDKAIEAMEGLDQAAFRGGFILEKIMGPISSGHLELRSRDPNENPSVTFNYFQDPQDLERCVQGLRTVEKIIESKAFSPFRYPNLPIPVLLNMTANSPVNLLPKHTNSSLSLQQFCRDTVMTIWHYHGGCQVGKVVDRDYKVLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILTQRLRATSADQTHQQIV 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04260 584 Gene3D - 163 509 - -
Viun3g04260 584 Gene3D - 46 559 IPR036188 -
Viun3g04260 584 PIRSF Alcohol_oxidase 21 578 IPR012132 GO:0050660
Viun3g04260 584 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
Viun3g04260 584 Pfam GMC oxidoreductase 415 560 IPR007867 GO:0016614
Viun3g04260 584 Coils Coil 381 401 - -
Viun3g04260 584 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 516 - -
Viun3g04260 584 SUPERFAMILY FAD/NAD(P)-binding domain 45 569 IPR036188 -
Viun3g04260 584 PANTHER OSJNBA0019K04.7 PROTEIN 14 571 - -
Viun3g04260 584 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04260 Viun-Chr3 50330442 50336104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04260 23 570 Miscellaneous Gene Families AT5G51950 58.378 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04260 - - gmx:100796752 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04260 3 50330442 50336104 Viun3g04260 3 50330442 50336104 ECH