Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04222 ATGGCTGATATCTTTGCGTGGCTCATCTCCTTCTTTATCCTTATTGCCTTAATTGTACTCGTCATTTATCAGTTAATGTGCCTGGCAGACCTTGAATTTGATTATATAAATCCATATGATTCCGCATCTCGAATAAACAAAGTGGTATTGCCTGAATACATTATAGTAGGTGTTCTATGCAGCTTCTACCTCGTCACAGGGCATTGGTTCATGGCACTGTTCTGCGCTCCGTACATCTACTACAACGTGAGACTGTATAGACAAGGAACTCATCTGATTGATGTTACAGAGATATTCAACTTGCTCCCTAAGGAAAAGAAGCAACGGCTTGTCAAACTCTTCTATCTTGTTTTTATCCTTTTCCTATCCTTATTTTGGATGATCTACACATCTTTGGAAGATCATGATGATTGA 414 0.3889 MADIFAWLISFFILIALIVLVIYQLMCLADLEFDYINPYDSASRINKVVLPEYIIVGVLCSFYLVTGHWFMALFCAPYIYYNVRLYRQGTHLIDVTEIFNLLPKEKKQRLVKLFYLVFILFLSLFWMIYTSLEDHDD 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04222 137 PANTHER CORNICHON-RELATED 4 131 - -
Viun3g04222 137 SMART Cornichon_2 4 125 IPR003377 GO:0016192
Viun3g04222 137 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04222 Viun-Chr3 49905799 49908832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04222 K20368 - gmx:100799061 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04222 3 49905799 49908832 Viun2g02487 2 31307526 31309558 PCT