Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04198 ATGTCTTCTTCCACAGCTTTCTTCTTCTTTCTCGTCAACGTCTCCTTACTTCTCACCCTCTCCTCCGCTGCGGATCCATTTGTTTCCTACGATTTTGAGGTCTCTTACATCACTGCCTCTCCACTTGGAGTTCCTCAGCAGGTCATTGCTATCAACAAAAAATTCCCGGGTCCTACTATCAATGTCACCACAAACAACAATGTTGCCGTCAATGTTCGGAACAAATTGGATGAGAGCCTCCTCCTTCATTGGTCTGGGATTCAGCAGAGGAGGAGTTCCTGGCAAGATGGTGTTCTTGGCACCAATTGTCCCATTCCTTCTAAGTGGAACTGGACTTACCAGTTTCAGGTAAAGGATCAAATTGGAAGCTTTTTCTACTTCCCTTCCCTTCATCTTCAGAGAGCTGCTGGTGGATTTGGGGGTTTCATTATAAACAACCGACCCATCATTCCGATTCCTTTTGATACCCCATATGATGACATTGTCGTTTTTATTGGAGATTGGTACACCCGCAACCATACGGACTTGAGGAAGGCCCTGGATGATGGAAAAGATCTTGGCATGCCGGATGGTGTTCTCATCAATGGGAAAGGCCCATACCGATATAACGATACACTTGTTCCTGATGGCATCGATTATGAAACAATTGAAGTCCATCCTGGAAAAACTTACCGACTTCGTGTACATAATGTTGGAGTATCAACAAGTCTGAATTTCAGGATCCAGAGTCATAACTTACTTCTGGCAGAGACAGAGGGGTCTTACACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGGCAATCTTATTCTTTTCTTGTAACCATGGACCAAAATGCAAGTTCAGATTACTACATTGTAGCAAGTGCCAGGTTTGTGAATGAATCACGTTGGCAAAAAGTTACTGGAGTTGCTATCTTGCGCTATACAAATTCCAAGGGGAAGGCGCATGGTCCTCTTCCACCGGCTCCTGATGATCAATTTGACAAAACTTACTCAATGAACCAAGCAAGATCCATCAGATGGAATGTATCAGCAAGTGGTGCTCGTCCTAACCCACAAGGGTCTTTCAGATATGGTTCCATCAATGTGACTGAGATTTATGTACTAAAAAATAAGCTACCTGAGAAAATTAATGGGAAGAGGCGAGCAACCGTCAGTGGAATCTCTTTTGTCAATCCTTCGACTCCAATCAGGCTTGCTGACCAGTACAAATTGAAGGGAGTATACAAGCTAGATTTTCCCACCAAGCCTATTACTGGACCACCTCGTGCAGAAACATCAATCATTAATGGAACCTATAGAGGATTTATGGAAGTTATATTGCAGAACAATGATACCAAGATGCATACTTATCACATGAGTGGATATGCATTTTTTGTAGTCGGGATGGATTATGGTGATTGGTCTGAGAATAGCAGGGGCACGTATAACAAGTGGGATGGAATAGCTCGCACTACAGCTCAGGTTTACCCTGGAGCATGGACTGCAATTTTGGTTTCCCTTGACAACGTAGGAGTATGGAATCTCAGAACAGAAAACCTTGATTCATGGTACCTTGGTCAAGAAACATATGTCAGGGTTGTCAACCCAGAGGTTACCAACAAGACTGAGCTGCCCATTCCAGACAATGCCCTCTTCTGTGGTGCCCTCAGTAAATTGCAGAAGCCTCAAGTTATTGCTTCTGCGGCATCACCAATCAACGGGAATACCCTGAAGCTGTTTTTCACCTGGCTGATTATATGCGCCTGGATCCATATATTCCAGTAA 1776 0.4381 MSSSTAFFFFLVNVSLLLTLSSAADPFVSYDFEVSYITASPLGVPQQVIAINKKFPGPTINVTTNNNVAVNVRNKLDESLLLHWSGIQQRRSSWQDGVLGTNCPIPSKWNWTYQFQVKDQIGSFFYFPSLHLQRAAGGFGGFIINNRPIIPIPFDTPYDDIVVFIGDWYTRNHTDLRKALDDGKDLGMPDGVLINGKGPYRYNDTLVPDGIDYETIEVHPGKTYRLRVHNVGVSTSLNFRIQSHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESRWQKVTGVAILRYTNSKGKAHGPLPPAPDDQFDKTYSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKLPEKINGKRRATVSGISFVNPSTPIRLADQYKLKGVYKLDFPTKPITGPPRAETSIINGTYRGFMEVILQNNDTKMHTYHMSGYAFFVVGMDYGDWSENSRGTYNKWDGIARTTAQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRVVNPEVTNKTELPIPDNALFCGALSKLQKPQVIASAASPINGNTLKLFFTWLIICAWIHIFQ 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04198 591 Pfam Multicopper oxidase 160 313 IPR001117 -
Viun3g04198 591 Gene3D - 19 146 IPR008972 -
Viun3g04198 591 FunFam Monocopper oxidase-like protein 158 351 - -
Viun3g04198 591 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Viun3g04198 591 PANTHER MULTI-COPPER OXIDASE 46 530 IPR045087 -
Viun3g04198 591 Pfam Multicopper oxidase 403 533 IPR011706 GO:0005507|GO:0016491
Viun3g04198 591 SUPERFAMILY Cupredoxins 22 174 IPR008972 -
Viun3g04198 591 Gene3D - 363 561 IPR008972 -
Viun3g04198 591 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Viun3g04198 591 FunFam Monocopper oxidase-like protein 363 561 - -
Viun3g04198 591 FunFam Monocopper oxidase-like protein SKU5 22 146 - -
Viun3g04198 591 Gene3D - 158 351 IPR008972 -
Viun3g04198 591 SUPERFAMILY Cupredoxins 376 551 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04198 Viun-Chr3 49631688 49636035 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04198 - - gmx:100788318 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04198 3 49631688 49636035 Viun3g04198 3 49631688 49636035 ECH