Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04186 ATGGAGTCTTTGAGATCTTCAACTCTGGCTCTTTTTTTTACCATCAACTTGCTTTTCTTTGCCATGGCAAGTGGCTGCTTCACTTGCACACAGCCAAAGCCTAACCCATTCCCTTACCCTAACCCTAACCCCACTCCTGCTGCAAAGAGCTGTCCCAGAGATGCACTTAAGCTTGGTGTGTGCGCTAACGTGCTTAATGGACCAATTGGTGCGGTGGTGGGATCACCACCGGACCACCCATGTTGCTCGGTGCTAGAAGGGCTTCTTGATCTTGAAGTTGCGGTTTGCCTCTGCACTGCCATCAAAGCTAACATACTTGGCATTAACCTTAACATCCCCATTTCGCTAAGCTTGATCCTTAACGCCTGCGAGAAGTCGCCACCCTCTGACTTCCAGTGCAGTTAA 405 0.4963 MESLRSSTLALFFTINLLFFAMASGCFTCTQPKPNPFPYPNPNPTPAAKSCPRDALKLGVCANVLNGPIGAVVGSPPDHPCCSVLEGLLDLEVAVCLCTAIKANILGINLNIPISLSLILNACEKSPPSDFQCS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04186 134 PANTHER - 6 133 - -
Viun3g04186 134 SMART aai_6 51 133 IPR016140 -
Viun3g04186 134 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Viun3g04186 134 CDD HPS_like 50 133 IPR027923 -
Viun3g04186 134 FunFam pEARLI1-like lipid transfer protein 1 49 134 - -
Viun3g04186 134 Pfam Hydrophobic seed protein 51 134 IPR027923 -
Viun3g04186 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 53 133 IPR036312 -
Viun3g04186 134 Gene3D - 49 134 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04186 Viun-Chr3 49482422 49483159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04186 41 133 Acyl Lipid Metabolism Gene Families AT4G22490 38.710 1.98e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04186 - - gmx:100527818 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04186 3 49482422 49483159 Viun3g04186 3 49482422 49483159 ECH