Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04183 ATGTCTCCAAAATCAAAAGCTAAAGCCATGTTCTTCATCTTGAAAATAACAATGTTAAACTTTTTGCCACCAATATATGCATGTGCTCCTTCTTGCACTCCGCCACGTCACCCCAAGCACCCACCGCATCACGGCGGAGGCAATCCAAAAGTATCCCCTCCTCTCCCACCGATCATAATCAACCCTCCGGTGGTGCCCCCGCCGGTGGTGATTTACCCTCCACCAAGCTCACCGCCGTACTCGCCGCCGCATCGGACATGCCCAATTGATGCCCTAAAATTGGGACTTTGCTTGGACGTGCTTGGGGGATTAGTGCATGTGGGGATAGGGGACCCAGTGGAGAACGTGTGCTGCCCCGTAATACAAGGGTTGCTTGACCTTGAAGCTGCTATTTGTCTCTGCACCGTTATTCGGGCTAAGCTTCTGAACCTGAATATCTTCTTACCTCTTGCACTTCAAGTTTTGATCACTTGTGGGAAGACTCCTCCACCTGGTTTTGTTTGTCCACCTCTGTACTGA 519 0.5067 MSPKSKAKAMFFILKITMLNFLPPIYACAPSCTPPRHPKHPPHHGGGNPKVSPPLPPIIINPPVVPPPVVIYPPPSSPPYSPPHRTCPIDALKLGLCLDVLGGLVHVGIGDPVENVCCPVIQGLLDLEAAICLCTVIRAKLLNLNIFLPLALQVLITCGKTPPPGFVCPPLY 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04183 172 CDD HPS_like 84 168 IPR027923 -
Viun3g04183 172 Pfam Hydrophobic seed protein 86 169 IPR027923 -
Viun3g04183 172 PANTHER - 7 168 - -
Viun3g04183 172 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 89 170 IPR036312 -
Viun3g04183 172 Gene3D - 85 170 IPR036312 -
Viun3g04183 172 SMART aai_6 87 168 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04183 Viun-Chr3 49437910 49438741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04183 76 170 Acyl Lipid Metabolism Gene Families AT4G22490 35.789 1.18e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04183 - - gmx:100802510 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04183 3 49437910 49438741 Viun3g04183 3 49437910 49438741 ECH