Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04181 ATGGCTTCAAAGGTTGCTCTTGTGTTGTGTCTGAACATCTTGTTTTTCAGTGTGGTAAGCTGCACATACGTGCCATGCAACCCACCACCGAAAGCTCCGAAACACCCACCATACACACCTGTGCCAAAGCCACCTTCCACAAACTATGGGACTTGCCCTGCAGACACCCTTAAGTTTGGTGTGTGCGCTGATGTGTTGGGTTTGATCGGCGTGCAGCTTGGGAAGCCACCAAAGACGCCGTGCTGCGAACTCATCCACGGCCTCGCCGATCTTGAAGCCGCCGTCTGTCTCTGCACCGCTCTCAAAGCTAACATCTTGGGCATCAACCTCAATGTTCCCGTCAAGTTGAACTTGCTCCTCAACTACTGCGGAAAGAAAACTCCTAAGGGTTTCCTCTGCAATTAA 405 0.516 MASKVALVLCLNILFFSVVSCTYVPCNPPPKAPKHPPYTPVPKPPSTNYGTCPADTLKFGVCADVLGLIGVQLGKPPKTPCCELIHGLADLEAAVCLCTALKANILGINLNVPVKLNLLLNYCGKKTPKGFLCN 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04181 134 FunFam pEARLI1-like lipid transfer protein 1 50 134 - -
Viun3g04181 134 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Viun3g04181 134 PANTHER - 2 133 - -
Viun3g04181 134 SMART aai_6 52 133 IPR016140 -
Viun3g04181 134 Gene3D - 51 134 IPR036312 -
Viun3g04181 134 CDD HPS_like 50 133 IPR027923 -
Viun3g04181 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 55 133 IPR036312 -
Viun3g04181 134 Pfam Hydrophobic seed protein 51 133 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04181 Viun-Chr3 49419761 49420516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04181 45 133 Acyl Lipid Metabolism Gene Families AT4G22490 35.955 3.42e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04181 - - gmx:100500229 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04181 3 49419761 49420516 Viun3g04181 3 49419761 49420516 ECH