Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04063 ATGGATCAATTGTCGGCGATCAGCGAGGACCTGGCCGAGATCGAGGGGCACATCGCCGACAATTTGCGCGCCCTACAAAATGGATTTCAGAAGTTGGAGAAGATTAAGGATTCGAATAGACAGAGCAGGCAGCTGGAAGAGCTCACGGAGAAAATGCGAGAATGTAAACGGCTTATCAAGGAGTTCGATAAAGAAGTCAAAGCTTTGGAGAATAACTTCGATAGAGAAACCAACAAAATGTTGAATGAGAAAAAGCAGTCAATGATCAAAGAGTTAAACTCATATGTTGCTTTGAAAAAGAAGTATTCTACAAATATTGAGCAGAAACGAATTGAACTCTTTGAGGGGCCAAGCGAAGGTTTTGCTGAAGAAAATGGCTTGCTAGCATCCTCAATGACTAACGATCAGCTAATGGATCATGGGAATAGGATGATGGATGAGACAGATCAGGCCATTGAAAGGGGAAAGAAGGTCGTTCTAGAAACAATAAATGTTGGTACAGAGACTGCAGCAGCTCTTAAGGCTCAGACGGAACAAATGAGCAGAGTTGTCAATGAGCTGGATTCGATCCATTTCTCTTTGAAGAAAGCATCACAATTGGTCAAGGAAATCGGTAGGCAGGTTGCTACTGACAAGTGTATTATGGTGCTACTTTTCCTTGTTGTCATGGGAGTAATTGCTATCATTATAGTAAAGCTTGTGCACCCGGAGAACAAGGACATTCGCGACATTCCAGGACTGGCTCCTCCAGTTCAGAACCGAAGACTGCTTTGGAGTCATAGTTGA 786 0.4326 MDQLSAISEDLAEIEGHIADNLRALQNGFQKLEKIKDSNRQSRQLEELTEKMRECKRLIKEFDKEVKALENNFDRETNKMLNEKKQSMIKELNSYVALKKKYSTNIEQKRIELFEGPSEGFAEENGLLASSMTNDQLMDHGNRMMDETDQAIERGKKVVLETINVGTETAAALKAQTEQMSRVVNELDSIHFSLKKASQLVKEIGRQVATDKCIMVLLFLVVMGVIAIIIVKLVHPENKDIRDIPGLAPPVQNRRLLWSHS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04063 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Viun3g04063 261 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 22 231 - -
Viun3g04063 261 Coils Coil 38 86 - -
Viun3g04063 261 Gene3D - 134 212 - -
Viun3g04063 261 Pfam Sec20 151 230 IPR005606 GO:0005484|GO:0006890
Viun3g04063 261 FunFam novel plant SNARE 11 133 212 - -
Viun3g04063 261 SUPERFAMILY SNARE fusion complex 132 205 - -
Viun3g04063 261 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Viun3g04063 261 SMART tSNARE_6 137 204 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04063 Viun-Chr3 48301417 48307535 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04063 K08494 - gmx:100786429 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04063 3 48301417 48307535 Viun3g04063 3 48301417 48307535 ECH