Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04053 ATGAAATTCTCTTCGTACTTACTGATATTCTTTATCTTTCTCTTTCTGTTCCAAAGCACCAACAGTTCTAATCTTATCTCTCAATCTTGCAAGGAGGCATCCAAGAATGATCCAAATTTGAAGTATGATTTCTGTGTTGCATCCCTTGAAGATGCTTCCTCCAATTTGAAACCACCACCCACCACTCTCGAAGGTCTTGTGGACATGTCAATTCAACTCACCAAGTCTAACGGAACAAACATGGTTTCCATCATTTCAAAGCTCTTGAAGGATAAAGATTTTGATCAATACGCAAAGGCTTGCTTACGAGATTGCTTTGATCTTTATTCGGATTCCCTTTCGGATTTAGATGATGCTGTTGCTGCTTTCAAGCGCAAGGATTTGGACACTGCTGCTATAAAGTTGAGTGCTTCTTTGGATACGTCTGATACATGTGAAGATCAATTCAAGGAAAAGAAGGGTGAAACGTCTCCTTTGACAAAGGAAAATCAAGTCTACTTTGAACTCAATGTAATATCTCTGGCCTTCCTCCAAATGTTTCGTCAACATTATTGA 555 0.3892 MKFSSYLLIFFIFLFLFQSTNSSNLISQSCKEASKNDPNLKYDFCVASLEDASSNLKPPPTTLEGLVDMSIQLTKSNGTNMVSIISKLLKDKDFDQYAKACLRDCFDLYSDSLSDLDDAVAAFKRKDLDTAAIKLSASLDTSDTCEDQFKEKKGETSPLTKENQVYFELNVISLAFLQMFRQHY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04053 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 180 IPR035513 -
Viun3g04053 184 SMART PMEI_2 21 176 IPR006501 GO:0004857
Viun3g04053 184 Pfam Plant invertase/pectin methylesterase inhibitor 24 175 IPR006501 GO:0004857
Viun3g04053 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 180 IPR035513 -
Viun3g04053 184 FunFam Putative invertase inhibitor 21 180 - -
Viun3g04053 184 NCBIfam pectinesterase inhibitor domain 1 179 IPR006501 GO:0004857
Viun3g04053 184 PANTHER OS02G0537100 PROTEIN 4 180 - -
Viun3g04053 184 CDD PMEI-Pla_a_1_like 30 179 IPR034088 -
Viun3g04053 184 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04053 Viun-Chr3 48127915 48128743 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04053 - - gmx:100817110 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04053 3 48127915 48128743 Viun3g04053 3 48127915 48128743 ECH