Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04042 ATGGCAGAGTTTCCAGGATATTTCCGTTACTGCTTGAACACAGGGAAACTTCTCCTTTTAGCAGTTTTGGTCTCTGGAGGTGTTGTCTTGCATATTTTGGCATGTGCGTTATATAAAAATTGGTGGCCAATGCTAACTGCGATAACATATGTGATTCTTCCAATACCTTTGCTCTTCTTCGCGGGATCTGAACGTTCTTCTGTATTTTCTGAATCAGATAACACCTGGATGAATGCAACCAAGTTCTTAAGTGGGGCATCAGCTGTGGGAAGCATTGCCATTCCAGCCATATTAAAGCATGCTGGTGTTATCAGTTGGGGAGCCCTTGCTATGGAACTCTCTTCATTCTTTGTGTTTGTATCTGCCATAATGTGTTACATAAGGATGAATGATGAAGATGATTATAGTGTTCTTTGA 417 0.4101 MAEFPGYFRYCLNTGKLLLLAVLVSGGVVLHILACALYKNWWPMLTAITYVILPIPLLFFAGSERSSVFSESDNTWMNATKFLSGASAVGSIAIPAILKHAGVISWGALAMELSSFFVFVSAIMCYIRMNDEDDYSVL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04042 138 PANTHER LEPTIN RECEPTOR-RELATED 15 134 IPR007262 -
Viun3g04042 138 Pfam Vacuolar protein sorting 55 18 134 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04042 Viun-Chr3 48052444 48054359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04042 1 134 EF-hand Containing Proteins AT1G32410 64.925 7.54e-64 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04042 - - gmx:100775400 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02290 2 30383942 30385976 Viun3g04042 3 48052444 48054359 PCT