Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04035 ATGAAAACAAGGAGAGGAAGACGCTCAGAGGCCTTTTGGCCCTCCCTTGTGATGAAGAAATGGTTAAACATAAAGCCAAAGGTGTATGATTTTAGTGAGGATGAAGTGGACACTGAAACTGAGAGTGAAGATGATGTTTGCTCTCTTAAAGACTCGAGAATGGGTGTGCGTGAAGAAAATCCACTAAGAACACAATCCATATTCCCAAGTCAAACATCAGATGCGTCTTGTAAGGGCCATAAGACCAGGCATAGAAGAGGGAAATCAGAAACTCTGCGTGTTCAATACATAAATACAAAGGAAGTGAGGGTAACAATTGGCACCTGGAACGTTGCTGGAAGACTTCCATCTAAGGATCTTGAAATTGAGGACTGGCTTTGCACCAATGAGCCAGCAGATATTTACATTATTGGTTTCCAAGAGGTAGTCCCCTTGAATGCTGGAAATGTTCTTGGGGCAGAGGATAATACACCAATCCGGAATTGGGAAGCAATCATTAGAAGAACTCTAAACAAATCTTCTGAACCTGAAACCAAGCCAAAAAGCTACAGTGCCCCTCCTTCTCCAGTCCTAAGAGCTTCTGCTTCTGCTGATGTTCTAGCAGACGGTATAGATGTTAATCCACTAGACACAATGAATGAGGAGTACCTGGGAAGTTGTAACAACGTTGAGGTGGAACAAGAGGAAGTGAAAAGCATAATTGGTATAGGAAGGAATTTACAGTTGAGGAAAATCAATGACATTGATCCTCATACCATACTTGACTGGCCTGAACGTCCTTTAGATGCAATCCCACATACCGATTCCAGTGCAAAATTGCGCAGAGTGTGGAGCTCAGACAGAATTGGCTTTAACTTGACAGAGAAGGCTTCAAAATATGGGAGTGTATTGAAACGGACACACCACAGTTCGGGAAATTTGGGCTTGTTATGGAAAGAACAGCAAGTGATGCCTGAGGAAGTAATCGATACCCTTGATGAGTTATCTGACATGTTATCTGATGAGGAAGATGATGCTTTTCTTGAATTGCCAAATGACAACGAAGATAATAATGGAATAGGTGGTGTGAAACCACATCGTAAGTATGTCCGAATCGTCAGCAAGCAGATGGTAGGAATATATGTGTCTATTTGGGTGCAGAGGAGGTTGAGAAGGCACGTTAACAACTTGAAAGTTTCTCCAGTTGGAGTTGGTCTCATGGGCTACATGGGAAACAAGGGATCTGTTTCAGTTAGTATGTCTCTCTTTCAGTCACGTTTGTGCTTTGTTTGTTCGCATTTGACGTCTGGTCAGAAGGATGGTGCAGAAATGAGACGAAACTCGGATGTTCATGAAATTCTTCGCCGCACTTGTTTCTCATCTGTCTTTGATACAGATCAGCCACAAACGATCCCATCACACGATCAAATTTTCTGGTTTGGGGATTTAAATTATCGTATCAATATGACGGATGAGGAGGTTCGAAAGCTCGTAGCCCTAAGGAAATGGGATGAACTGATGAATTACGATCAGTTAACTAGAGAATTACGTAGTGGGCACGTGTTTGATGGATGGAAAGAGGGGGTAATAAACTTCCCACCCACTTACAAGTATGAATTTAATTCTGACATATATATCGGTGAAAACCCGAAAGAAGGAGAAAAGAAGAGATCTCCGGCCTGGTGTGATCGTATACTGTGGTTGGGCAAAGGAATAAAGCAACTTGAATATAAGCGAACCGAAAATAAACTCTCGGATCATCGACCAGTTAGTTCAATATTCTCCATTGATGTAGAAGTATTTGACCAACGTAAATTACAGAGAGCCCTGAATTACACAACAGCAGTTGTACATCCTGAAGTTTTCCTTACAGAAGATGGACAATGGTCATACTAG 1875 0.4197 MKTRRGRRSEAFWPSLVMKKWLNIKPKVYDFSEDEVDTETESEDDVCSLKDSRMGVREENPLRTQSIFPSQTSDASCKGHKTRHRRGKSETLRVQYINTKEVRVTIGTWNVAGRLPSKDLEIEDWLCTNEPADIYIIGFQEVVPLNAGNVLGAEDNTPIRNWEAIIRRTLNKSSEPETKPKSYSAPPSPVLRASASADVLADGIDVNPLDTMNEEYLGSCNNVEVEQEEVKSIIGIGRNLQLRKINDIDPHTILDWPERPLDAIPHTDSSAKLRRVWSSDRIGFNLTEKASKYGSVLKRTHHSSGNLGLLWKEQQVMPEEVIDTLDELSDMLSDEEDDAFLELPNDNEDNNGIGGVKPHRKYVRIVSKQMVGIYVSIWVQRRLRRHVNNLKVSPVGVGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGAEMRRNSDVHEILRRTCFSSVFDTDQPQTIPSHDQIFWFGDLNYRINMTDEEVRKLVALRKWDELMNYDQLTRELRSGHVFDGWKEGVINFPPTYKYEFNSDIYIGENPKEGEKKRSPAWCDRILWLGKGIKQLEYKRTENKLSDHRPVSSIFSIDVEVFDQRKLQRALNYTTAVVHPEVFLTEDGQWSY 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04035 624 SMART i5p_5 275 595 IPR000300 GO:0016791|GO:0046856
Viun3g04035 624 MobiDBLite consensus disorder prediction 170 190 - -
Viun3g04035 624 FunFam Type I inositol polyphosphate 5-phosphatase 2 299 613 - -
Viun3g04035 624 SUPERFAMILY DNase I-like 94 608 IPR036691 -
Viun3g04035 624 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 17 607 IPR045849 GO:0004445
Viun3g04035 624 FunFam Type I inositol polyphosphate 5-phosphatase 2 82 194 - -
Viun3g04035 624 Gene3D Endonuclease/exonuclease/phosphatase 309 614 IPR036691 -
Viun3g04035 624 Gene3D Endonuclease/exonuclease/phosphatase 83 186 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04035 Viun-Chr3 47993732 47997645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04035 362 596 Acyl Lipid Metabolism Gene Families AT1G65580 32.014 6.23e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04035 K24221 - gmx:100807214 1078.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02274 2 30333392 30336871 Viun3g04035 3 47993732 47997645 PCT