Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03697 ATGGAGCAGGGTGGCAGAGAAGACCAGACCACGATGACGTTCAACAAATATGCCTTTGCTTGTGCTATAGTTGCTTCAATGGTTTCCATCATCTCTGGTTATGATACTGGTGTGATGAGTGGGGCAATAATATTCATCAAGGACGATATTGGAATCAGCGATACCCAGCAAGAGGTTCTTGCAGGAATCTTGAACCTATGCGCGTTGGTAGGATCATTGGCTGCAGGAAGAACCTCTGATTACATTGGTCGTCGCTACACAATCTTGTTAGCCTCCGTTCTGTTCATGGTGGGTGCAATTCTAATGGGGTATGGCCCAAACTATGCAATATTAGTGGTTGGAAGGTGTGTTGGTGGTGTGGGTGTGGGTTTCGCTCTGATGATAGCACCGGTTTACTCGGCAGAGATTTCTTCTGCATCATCGAGGGGTTTTCTAACCTCTTTGCCGGAGCTTTGTATCGGCATTGGAATCTTACTTGGCTACGTATCGAACTTCTTCTTGGGAAAATTGACCTTGAAGCTCGGATGGAGGGTGATGCTGGGTGTTGCTGCGCTTCCTTCACTTGCTTTGGCTCTGGTTATTCTAGCAATGCCAGAGTCGCCAAGGTGGTTAGTGATGCAGGGTCGTTTGGAAGGTGCGAAGAAGGTGCTGATGAAAGTTTCAAACACCACGCAAGAGGCTGAGCTTCGTTTCAGCGAAATAAAAGTCGCTGTAGGGTTTGACGAGAACAGTGGCAAGCTCCCTCAGAAGTCGCAGGGTGAAGGGGTTTGGAAAGAGTTGCTTGTGAGGCCCACACCGGAAGTTCGATGGATGCTGATTGCAGCAGTAGGGATTCATTTTTTCGAGCATGCGACCGGCATTGAAGCAGTGATGTTGTACAGTCCGAGAATCTTTAAGAAAGCTGGTGTGAGAAGTAAGGATAAGCTCTTGCTTGCAACGGTCGGAATTGGCCTCACGAAGATCATTTTCTTGGTGATGGCTTTGTTTTTGCTTGACAAAGTTGGTAGGAGGCGCCTCTTGCAAGTAAGCACCGGGGGAATGATTTGTGGGCTCACACTTTTGGGTTTTAGTTTGACCATGGTTGATGAATCCAGTGAAAAGGTGTTGTGGGCTTTGAGCCTTAGCATTGCGGCCACTTATGCTTATGTTGCTTTCTTCAACATTGGGCTTGGGCCTGTGACTTGGGTGTACAGCACGGAGATATTCCCTTTGAAGTTGAGGGCGCAAGGGGCTAGTATAGGAGTTGCAGTGAACAGAACCATGAATGCTGTGGTTTCCATGAGTTTTCTTTCAATCTCCAAAGCATTCACCATCGGTGGGAGCTTCTTCATGTTCGCTGGTGTATCTGTACTCGCTTGGTTGTTCTTTTACTTTTTCCTTCCTGAAACCAAAGGCGTGCCTTTGGAAGAGATGGAAATGGTTTTTACCAAAAAATCCTCCGCTAAAAATGTAGTACCAAAATCTGATCTCAGAAAGAAAGAAGAAAAACGTAGACCCAAATTTCATACCCAAACAAAACCCGACCACTTTTATTCAATTGAAATCCAAGAAATGAAGGATGAAGAGACACTCCCAATTGCAAAAAAGGAAACCCTAGCCTCAGATTCAGGTTTATTCGGAAGAGGAAGTTACAAATTCTGGGCACTGGCGGCCATTTTGCTCCTCGCACTGTGGTCCATGTTCACCGGCACCGTCTCGCTCCGGTGGTCGGGCACGCTCAACACCTTCTCCCATGACCTCCACGTGCCGCTCCACGACCAACTCGACGTCCTCGAAATGGAGGAGAGAGAGAAGGTGGTGAGGCACATGTGGGACGTGTACACGAATAACCGTAGGATCAGGTTGCCGCGGTTCTGGCAAGAGGCCTTCGAAGCTGCGTACGAGGATTTGAGCAGTGACGTGGCGGAGGTTAGAGACGCTGCCATCGCCGAGATCGCTAACATGTCTCTAAGCTCCTTTGATATTCAATTGCCTCCTGTTACACATTCTACGAGAGCACAGGAACTTGATAAGAACCTCGAGCAATTTGAAAAAGGTAAAGGTGCAACCTCCGAACGTGCGTAG 2064 0.4787 MEQGGREDQTTMTFNKYAFACAIVASMVSIISGYDTGVMSGAIIFIKDDIGISDTQQEVLAGILNLCALVGSLAAGRTSDYIGRRYTILLASVLFMVGAILMGYGPNYAILVVGRCVGGVGVGFALMIAPVYSAEISSASSRGFLTSLPELCIGIGILLGYVSNFFLGKLTLKLGWRVMLGVAALPSLALALVILAMPESPRWLVMQGRLEGAKKVLMKVSNTTQEAELRFSEIKVAVGFDENSGKLPQKSQGEGVWKELLVRPTPEVRWMLIAAVGIHFFEHATGIEAVMLYSPRIFKKAGVRSKDKLLLATVGIGLTKIIFLVMALFLLDKVGRRRLLQVSTGGMICGLTLLGFSLTMVDESSEKVLWALSLSIAATYAYVAFFNIGLGPVTWVYSTEIFPLKLRAQGASIGVAVNRTMNAVVSMSFLSISKAFTIGGSFFMFAGVSVLAWLFFYFFLPETKGVPLEEMEMVFTKKSSAKNVVPKSDLRKKEEKRRPKFHTQTKPDHFYSIEIQEMKDEETLPIAKKETLASDSGLFGRGSYKFWALAAILLLALWSMFTGTVSLRWSGTLNTFSHDLHVPLHDQLDVLEMEEREKVVRHMWDVYTNNRRIRLPRFWQEAFEAAYEDLSSDVAEVRDAAIAEIANMSLSSFDIQLPPVTHSTRAQELDKNLEQFEKGKGATSERA 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03697 687 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 464 IPR020846 GO:0022857
Viun3g03697 687 PRINTS Sugar transporter signature 29 39 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun3g03697 687 PRINTS Sugar transporter signature 282 292 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun3g03697 687 PRINTS Sugar transporter signature 399 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun3g03697 687 PRINTS Sugar transporter signature 376 397 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun3g03697 687 PRINTS Sugar transporter signature 112 131 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun3g03697 687 Gene3D MFS general substrate transporter like domains 10 479 IPR036259 -
Viun3g03697 687 Pfam Protein of unknown function (DUF1195) 531 658 IPR010608 -
Viun3g03697 687 Pfam Sugar (and other) transporter 21 475 IPR005828 GO:0016020|GO:0022857|GO:0055085
Viun3g03697 687 ProSitePatterns Sugar transport proteins signature 2. 117 142 IPR005829 GO:0016020|GO:0022857|GO:0055085
Viun3g03697 687 FunFam probable polyol transporter 4 11 478 - -
Viun3g03697 687 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 11 479 IPR045262 GO:0015144
Viun3g03697 687 NCBIfam sugar porter family MFS transporter 14 471 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun3g03697 687 ProSitePatterns Sugar transport proteins signature 1. 75 92 IPR005829 GO:0016020|GO:0022857|GO:0055085
Viun3g03697 687 ProSitePatterns Sugar transport proteins signature 1. 327 344 IPR005829 GO:0016020|GO:0022857|GO:0055085
Viun3g03697 687 SUPERFAMILY MFS general substrate transporter 11 472 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03697 Viun-Chr3 43898133 43905077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03697 15 475 Organic Solute Cotransporters AT2G18480 72.532 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03697 - - var:108328789 1253.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03697 3 43898133 43905077 Viun3g03697 3 43898133 43905077 ECH