Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03626 ATGTCCTTGGTTCCCAAAACTGAGAAAAACGACGTCCCCGTCGTCGACATTGATAGCGACGGCGACGACGGCGTCACTGTAGCTTCGGCCATTAAAGACGAGTTGTCGCAGAAGATTCCATCGTCTCAAGTCGAGCTTGTGCAGCAAGAAACCCCTGTCTCCAGTTCCGCTCTTTCTGTCTCCGACGGCCGGTTTAGAAGTTTCTGGAAAGCCGGGGATTACGCTGTTGGTCCCTCTTCGAAGCCCACTGCCTTTCAAGGTCACTTAGAGCATGCCCGGGTGCACCCCAAGTTTCTGCATTCTAATGCGACTTCCCATAAATGGGCTTTTGGAGCAATTGCTGAGCTTGTGGATAATGCTGTTGATGAGATTCAAAATGGTGCAACTTTTATAAAGATTGACAAGTTTGATGTCAAGAAGGATAATTCACCAGCATTATGTTTCCTAGATGATGGTGGTGGAATGGACCCTAGCTCAATTCGAAAATGCATGAGCTTGGGTTATTCATCAAAGAAGTCAAAGACAACAATTGGACAATATGGCAATGGATTCAAGACTAGTACCATGAGACTGGGTGCTGATGTTATCGTTTTCAGTAGGGCAAGGCATTTGGGCCGGGCAACACAAAGTGTGGGTTTACTATCCTATACCTTTTTGCGGAGAACTGGGCAAGATGATGTAGTTGTTCCAATGATAGATTTTGACACATCTGGCCATTGGCCTGAGCCAATTGTATATAGCTCACAGGATGAATGGACAGCGAACTTGAAAACAATTCTTGATTGGTCTCCTTTCACATCAAAGGAGGAGCTCATGCTTCAGTTTGATGATATAGGATCACATGGAACCAAAGTTTTAATATACAATTTGTGGTTGAATGATGAAGGGATATATGAACTGACTTTTGATGATGATATGGAGGATATTATGCTGAGAGATGAGGCCAGCCATGGGGCTGAGAAAAAATTGAACAAAAAAACTGTTCTGCTTCAGTCTCATATTTCTTACCGCCTTCGTTATTCTTTACGGGCATATGTTTCCATGTTGTACCTCAGAAAATTCTCCAACTTCAAAATCATACTAAGGGGTAAACTTGTGGATCAGTACAACATAGCAGATAACTTGATACATTCAAAAGTAATTCCGTATAGGCCTCAGCTAGCCATTGCATCAAATGAGGCCGCAGCAGAGACAAAGACAACCATTGGATTTATAAAGGAGGCACCTTCTATCAAGGTTACTGGATTTAATGTCTACCACAAAAATCGCCTAATCAAGCCCTTCTGGAAAGTTGTTGCCGATGGTTCATCAAAAGGGAGCTGTGTTGTTGGAGTTCTTGAAGCCAATTTTATAGAACCAGCGCATGACAAGCAGGATTTTGAGAGATCAGTTCTGTTCATTCGGTTGGAAAACAAGATGAAACAAATGACAATGGATTACTGGAAAGGCCACTGTCACTTGATTGGATATCAGCCCCTAGATTTCAGATCACAAAATGTTGTAAAAGAAGCCCAGATACGAAAATCAGCTGAACATTCAACTAATCCACAGAATGAATTGCCCTCTGACCAACAGTTTACTGGTGTTGTACCTGAGCATCGAAACACCCTGAGTTTAAATCAAACAATTGTTGATCTTGATGTGACTGGCGTGCAAGATTTAAGTCACGAGCAACTTGTGTGA 1683 0.4266 MSLVPKTEKNDVPVVDIDSDGDDGVTVASAIKDELSQKIPSSQVELVQQETPVSSSALSVSDGRFRSFWKAGDYAVGPSSKPTAFQGHLEHARVHPKFLHSNATSHKWAFGAIAELVDNAVDEIQNGATFIKIDKFDVKKDNSPALCFLDDGGGMDPSSIRKCMSLGYSSKKSKTTIGQYGNGFKTSTMRLGADVIVFSRARHLGRATQSVGLLSYTFLRRTGQDDVVVPMIDFDTSGHWPEPIVYSSQDEWTANLKTILDWSPFTSKEELMLQFDDIGSHGTKVLIYNLWLNDEGIYELTFDDDMEDIMLRDEASHGAEKKLNKKTVLLQSHISYRLRYSLRAYVSMLYLRKFSNFKIILRGKLVDQYNIADNLIHSKVIPYRPQLAIASNEAAAETKTTIGFIKEAPSIKVTGFNVYHKNRLIKPFWKVVADGSSKGSCVVGVLEANFIEPAHDKQDFERSVLFIRLENKMKQMTMDYWKGHCHLIGYQPLDFRSQNVVKEAQIRKSAEHSTNPQNELPSDQQFTGVVPEHRNTLSLNQTIVDLDVTGVQDLSHEQLV 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03626 560 Pfam Morc6 ribosomal protein S5 domain 2-like 340 481 IPR041006 -
Viun3g03626 560 FunFam MORC family CW-type zinc finger protein 4 95 296 - -
Viun3g03626 560 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 111 202 - -
Viun3g03626 560 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 109 305 IPR036890 -
Viun3g03626 560 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 51 526 IPR045261 GO:0016887
Viun3g03626 560 Gene3D - 94 294 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03626 Viun-Chr3 43055878 43085032 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03626 - - gmx:100781431 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03626 3 43055878 43085032 Viun3g03626 3 43055878 43085032 ECH