Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03620 ATGGACCCCGTGGAGGTTCACCCTCCTTGGGTTCCCGAGGATGACCTTCTCCTCAAGAACGCCGTTGAGGCTGGTGCTTCGCTGGAATCGCTGGCAAGAGGAGCTGTTCGGTTCTCGCGGCGGTATTCCTTTAGGGAATTGCAAGATCGGTGGCTGTCTCTGCTCTATGACGGGGATGTTTCCACCAAGGCGGCCCTTGCCATGAGGAATTTGGAGCTGGCCAAGTCAGCTGCTGCCGGTGGTGAAGGAAGTGGTGGTGGTGGTGGTGGGGAGAAGAGGAAATTTCAAAGCAGTGCTGGTGTTGGGAAAAAGATGAAATTTCAAAGCGTTCGCAAGCAGTACTGCAGCATGCAGAAAAAACTTCGCCGGCACCGCAGTGGCGTCATGTCTTCCGAGGTAAAGAACGGGGTGGGGTGTGAGGGTAAAGAGAATGTGGTGGTTGACGGTAATTTAAATAGTGATGTTGTGAATAGTAGTGTAGTTGGTTATGGGAATTGCTTGGGGTCAGAAGGGGTAGAGGTGGGGCAATTGGGTGATTTGGTGAGTGATGTACCTCTGTGGAAAACGATTGAGGATGTTTCTTTGCCTGATTTGCCTGTTCATGTTAGTGTTGAGGGTAAAAGTTGTGTTTCTGAAGGGGGAGTGGATTTGAAAGATGAGTGCGGGAATGGTGGGTTGAAATTGAATGCTCCTGATGCCAAAAGTCTCTCGAACTTGGCAAATGAGGATGAACTTCTCTTTATGAATGTAGAGGGGAAGGAGGTAATGGCTATGGATAAGAATAAGGATAAGCCACGTTATGATAATGTTGATTCACTTCTGTTGAGTTCTTCCGCTGATGTTCCTGTATTGCAGAAGTTGGATGTGGAAGCAAAACTTTCTGTGCCTGGTGGGTGTGTTTCTGATGGGCAGGGAATTGCAGCTAATCCATTAGGTGCCAGTTGTGGTGATCAGCATTTCGTTTCTGATCCAAGAAACAATGCTGCGTTGTCAGCTGTAGCACAAAGTCCTCACTCTGAACACAGCGAGGGATTTATGATCTGTGTGTTGAATACTGAGCACCCTGATATCCCATGCAATGTTAATTTGGATGTGTCCGTCGTAATTCCTGAATTAGCACCTCTAAAATCCCAACCAGTTGTTAAAGAGGCGGGTTTTTCAGAATCTGCTATTAGTAATCAAAGAAGAAATGGACCAGATGGAAGCCTGAAGAAAGAAGCCGTTCTTTCTCAGTCTTTTGCTTCAAAAAATTCAAGCTACAAACCTGTTGTTTTTGGACTGAAAAGTGAAAATCCTGGAAGAAACGCTATAACTGCAGTTTCTAGACAGAGTAACAATGTTGATGTCAACTCAAGTCATGGCAGATCAGTTCGTGCAACTGTGATGCCTGCCTTAGAGGGACATCTGAAACAAGAGGAAAATTTCACTGAAGGTGTATCACATAAACAGGACATTGACGCTCCAGCTGCTGCACATGTTAAGGCTGAGGAACATAAAGCTTTATCAAAATCAGAAGCAAAATCATTATCTCTAGATCAGGAAGGAGGTGATATTGAAGATGATGGAGAAGACGATTATGATGATTATTATGGTGATGAACTTCCTTACTTTTCTGATGTTGAGACAATGATTCTTGAAATGGATTTATCTCCAATGGATGAAGATCCAAACGCAAGGAGAGAAGTATTGAGATATCAACATGAAGATAGTAGGAAGACCATCATGAGATTGGAGCAAGGTGCTCAGTCCTCCATGGGAAGAGCCATTAGATCTCATGGTGCACTTGCAGTAGTGTATGGGCGCATTCTGAAGGAATATATTAGAAAAAGCAAGGTTGTACTTGGCAGAGCAACAAATGATGTACATGTTGATATTGACTTGGGAAAAGAAGGGGAGGAGGTGGCTACAAAAATATCTAGAAGACAGGCTTTAATAAAGCTCGACGCAGATGGTTCTTTCATAATTAAAAATCTTGGTAAGAGATCTATCTTCTTGAATGGCAAAGAAATTGCTACAGGACAAGCGCGGGGTCTTGGTGCTAGTAGTGTGATCGAGATTAGAGGCATTTCACTCATCTTTGAGACCAATAATAGATGCGTGAAGAGGTTTTTAGAAAATGTGAATGGGAAGATATGA 2136 0.4401 MDPVEVHPPWVPEDDLLLKNAVEAGASLESLARGAVRFSRRYSFRELQDRWLSLLYDGDVSTKAALAMRNLELAKSAAAGGEGSGGGGGGEKRKFQSSAGVGKKMKFQSVRKQYCSMQKKLRRHRSGVMSSEVKNGVGCEGKENVVVDGNLNSDVVNSSVVGYGNCLGSEGVEVGQLGDLVSDVPLWKTIEDVSLPDLPVHVSVEGKSCVSEGGVDLKDECGNGGLKLNAPDAKSLSNLANEDELLFMNVEGKEVMAMDKNKDKPRYDNVDSLLLSSSADVPVLQKLDVEAKLSVPGGCVSDGQGIAANPLGASCGDQHFVSDPRNNAALSAVAQSPHSEHSEGFMICVLNTEHPDIPCNVNLDVSVVIPELAPLKSQPVVKEAGFSESAISNQRRNGPDGSLKKEAVLSQSFASKNSSYKPVVFGLKSENPGRNAITAVSRQSNNVDVNSSHGRSVRATVMPALEGHLKQEENFTEGVSHKQDIDAPAAAHVKAEEHKALSKSEAKSLSLDQEGGDIEDDGEDDYDDYYGDELPYFSDVETMILEMDLSPMDEDPNARREVLRYQHEDSRKTIMRLEQGAQSSMGRAIRSHGALAVVYGRILKEYIRKSKVVLGRATNDVHVDIDLGKEGEEVATKISRRQALIKLDADGSFIIKNLGKRSIFLNGKEIATGQARGLGASSVIEIRGISLIFETNNRCVKRFLENVNGKI 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03620 711 MobiDBLite consensus disorder prediction 487 514 - -
Viun3g03620 711 FunFam Microspherule protein 1 555 706 - -
Viun3g03620 711 MobiDBLite consensus disorder prediction 487 525 - -
Viun3g03620 711 MobiDBLite consensus disorder prediction 78 101 - -
Viun3g03620 711 CDD FHA_MCRS1 591 696 - -
Viun3g03620 711 PANTHER MICROSPHERULE PROTEIN 1 8 708 IPR037912 GO:0002151|GO:0031011|GO:0071339
Viun3g03620 711 Gene3D - 562 706 - -
Viun3g03620 711 ProSiteProfiles Forkhead-associated (FHA) domain profile. 612 670 IPR000253 GO:0005515
Viun3g03620 711 SMART FHA_2 611 670 IPR000253 GO:0005515
Viun3g03620 711 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Viun3g03620 711 SUPERFAMILY SMAD/FHA domain 604 694 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03620 Viun-Chr3 42915756 42920416 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03620 - - vra:106769492 1196.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03620 3 42915756 42920416 Viun3g03620 3 42915756 42920416 ECH