Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03559 ATGTCGGAGATAGTGAAGCAACTGTTGGCAAAGCCGATCCAATTGGCGGACCAAGTCACCAAGGCAGCGGAAGAGGCCAGTTCCTCCTTCAAGCAAGAGTGCTTAGAACTCAAATCCAAGACCGAAAAACTCGCGGGGCTTCTTCGACAAGCGGCGCGTGCCAGCTCCGACCTGTACGAGCGTCCCACGCGGCGCATAATCGCCGACACCGAACTCGTCCTCGACAAGGCGCTGTCTTTGGTGCTGAAATGCCGTGCCAACGGCCTCATGAAGCGCGTGTTCAGCATCATTCCGACGGCGGCGTTTCGCAAGATGTCGTCCCAACTCGAGAATTCCATCGGCGACGTGTCGTGGCTCCTCCGGGTGTCGGCTCCGGCGGAGGATCGCGGCGACGAGTATCTCGGGCTCCCTCCGATAGCCGCCAACGAGCCCATTTTGGGCCTCATTTGGGAGCAGGTGGCGACCCTCCACACGGGCTCTCTCGACGACCGATCTGATGCAGCCGCGTCGCTGGTGTCGCTCGCACGTGACAACGACCGCTACGGGAAGTTGATCATCGAGGAAGGTGGGGTTGGACCCTTGTTGAAGCTGATGAAGGAGGGGAAAAAAGAGGGTCAGGAGAACGCCGCCAGGGCTATTGGGCTTCTCGGCCGTGACCCTGAGAGCGTGGAGATTATGATCCACGCGGGGGTGTGCTCTGTCTTCGCCAAAGTCCTGAAAGAAGGTCCCATGAAAGTTCAAGCTGTGGTTGCCTGGGCCGTGTCGGAGTTGGCCGCTAAATACCCTAAATGTCAAGATCTTTTCGCTCAGCATAACATCGTTCGCTTGCTTGTAAGTCATCTTGCTTTCGAAACCGTTCAGGAGCATAGTAAATACGCAATTGTTAGCTACAAACCCACATCAATCCATGCTGTTGTTATGGCCAGTAATAACTCTAATGGCAATAGTTTGAGAAAGGAGAGTGAAGATGAGGAGAAGCTGATGCAGAGTCGCATGCAGCATCCTCTGGGTGATAAGTCCACAAATCAGATGCACAAAGTGGTGACAAGCACGATGGCAATGCATGCTGCCAACAAGCAGCAGCAACAGTCCAATGAAGACAATGGAGTTGCTCAGAACCCAAAGGCCAATGGGAATAGCAATGGCAATGGCAATGGCAATGGCAAGCAAAACCATCAGTCCCACCAGCAAAGCTATACCTACTCTGGGATTAACATGAAGGGAAGGGAACTGGAGGACCCGGAGAACAAGGCTTACATGAAAGCAATGGCAGCAAGAGCCCTCCGGCAGCTCCTAAAGGGCAACGTGGCCATTTGTCGGAGCATCACCGAATCGAGGGCTCTCTTGTGCTTTGCCATTCTCCTTGAGAAAGGGTCTGAGGATGTGAAGTACAATTGTGCCTTGGCAGTGAAGGAGATCACTGCAGTGGCAGAAAAAGATGCAGAATTGAGAAGATCAGCTTTCAAACCCAACTCTCCTGCTTGCAAGGCTGCTGTTGATCAAGTGCTCAAGATCATCGAGAAGGAAGACACAAAACTCCTCATTCCTTGCATAAAGGCTATAGGGAATTTGGCAAGGACATTCCGGGCAACAGAGACAAGGATAATCGGTCCCTTGGTCCGGCTTCTTGATGAAAGAGAGGCAGAAGTGTCAAGAGAAGCTGCAATCTCTCTCACAAAATTTGCCTGCTCTGAAAACTACCTCCACCTTGATCACTCCAAGGCAATCATAAGCGCAGGTGGTGCTAAACACTTGGTCCAGCTTGTGTATCTTGGAGAACAAACAGTTCAGGTTTCGGCACTGGTTCTGCTCTCCTACATTGCATTGCATGTGCCGGACAGCGAGGATCTTGCTCGGGCCGAGGTTCTTGGAGTGCTTGAATGGGCTTCGAAACAACCCAGCGTGACGCAGGATGAAACCATCGAGGCTTTGTTGCAGGAATCCAAAGGTAGGCTTGAGCTTTATCAGTCTAGAGGTTCAAGAGGATTCCAAAAGTTGCATCAATAA 2007 0.5222 MSEIVKQLLAKPIQLADQVTKAAEEASSSFKQECLELKSKTEKLAGLLRQAARASSDLYERPTRRIIADTELVLDKALSLVLKCRANGLMKRVFSIIPTAAFRKMSSQLENSIGDVSWLLRVSAPAEDRGDEYLGLPPIAANEPILGLIWEQVATLHTGSLDDRSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLMKEGKKEGQENAARAIGLLGRDPESVEIMIHAGVCSVFAKVLKEGPMKVQAVVAWAVSELAAKYPKCQDLFAQHNIVRLLVSHLAFETVQEHSKYAIVSYKPTSIHAVVMASNNSNGNSLRKESEDEEKLMQSRMQHPLGDKSTNQMHKVVTSTMAMHAANKQQQQSNEDNGVAQNPKANGNSNGNGNGNGKQNHQSHQQSYTYSGINMKGRELEDPENKAYMKAMAARALRQLLKGNVAICRSITESRALLCFAILLEKGSEDVKYNCALAVKEITAVAEKDAELRRSAFKPNSPACKAAVDQVLKIIEKEDTKLLIPCIKAIGNLARTFRATETRIIGPLVRLLDEREAEVSREAAISLTKFACSENYLHLDHSKAIISAGGAKHLVQLVYLGEQTVQVSALVLLSYIALHVPDSEDLARAEVLGVLEWASKQPSVTQDETIEALLQESKGRLELYQSRGSRGFQKLHQ 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03559 668 MobiDBLite consensus disorder prediction 355 396 - -
Viun3g03559 668 SUPERFAMILY ARM repeat 155 636 IPR016024 -
Viun3g03559 668 SMART arm_5 435 475 IPR000225 GO:0005515
Viun3g03559 668 SMART arm_5 177 218 IPR000225 GO:0005515
Viun3g03559 668 SMART arm_5 491 526 IPR000225 GO:0005515
Viun3g03559 668 SMART arm_5 569 609 IPR000225 GO:0005515
Viun3g03559 668 SMART arm_5 219 259 IPR000225 GO:0005515
Viun3g03559 668 FunFam Armadillo repeat only 4 2 122 - -
Viun3g03559 668 Gene3D - 149 333 IPR011989 -
Viun3g03559 668 MobiDBLite consensus disorder prediction 311 342 - -
Viun3g03559 668 MobiDBLite consensus disorder prediction 317 332 - -
Viun3g03559 668 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
Viun3g03559 668 FunFam Armadillo repeat only 2 151 320 - -
Viun3g03559 668 Gene3D - 3 122 IPR036537 GO:0007166
Viun3g03559 668 PANTHER ARMADILLO REPEAT ONLY 4 1 660 - -
Viun3g03559 668 Gene3D - 407 652 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03559 Viun-Chr3 42409937 42412802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03559 - - gmx:100794693 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03559 3 42409937 42412802 Viun3g03559 3 42409937 42412802 ECH