Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03420 ATGGGAATTTTCCCAAACACGTTCTTCACCAAAGCCCGCAACCTCATAGGCTTTGGGCTCGCTTCCACCGCCGCCGCAGCCACAATCGCGGCCTCCAATTCCAACGTGTCTTCTTCTTCGTCCTCTTCTTTTTTTTCTTCTTCTTCTTCGTCATCTTCTTCTCCTTCATCCACCACCTCTTCCACCTCTTCGTCCGACGCCGGGGATACTTCTTCCTCCGATGGCGAAATCGTCCCCCGGAAAATACTGAAAACGAAGGTTTGCATCATCGGAAGCGGGCCGGCGGCGCACACCGCCGCCATTTACGCTGCTCGAGCGGAGCTGAAGTCGGTCCTCTTCGAAGGATGGATGGCGAACGGCGTCGCTCCTGGCGGCCAGCTAACCACCACCACGGACGTTGAGAACTTTCCGGGATTTCCGGCTGGCATCCTCGGCGCCGAGCTCATGGACCGCTGTCGCGAGCAGTCGCAACGTTTCGGCGCCGAGATAGTCACGGAGACCGTGACGACAGTGGACTTCTCCGAACGGCCGCTTAGGGTTTTCACCGACTCCACCACTGTGGAAGCTGAATCCGTCATCGTCGCCACGGGCGCTGTTGCTAAGCGGCTGAATTTCGACGGCGCGGGTGACGGCCCCGACGGGTTCTGGAACCGCGGGATATCGGCGTGCGCCGTGTGTGACGGTGCCGCGCCGATATTCCGTGACAGACCTCTGGCGGTTATCGGTGGCGGAGATTCTGCTATGGAGGAAGCTACCTTCCTCACCAAGTTTGGTTCCAAAGTGTATGTAATTCATAGAAGGGACAAGTTTAAGGCTTCTAAGATCATGCAGGGGAAGCTGATGCGTAATCCCAAAATTGAGGTGTTGTGGAATTCAGTAGTGGTCGGGGCTTATGGGGATAATAAGGGTAGGGTTCTTGGTGGGGTTAAGGTGAAGAACGTGGTGACTGGGGTTGTGTCTGATTTGAAAGTTTCTGGTTTGTTCTTTGCAATTGGGCATGAACCTGCCACGAAATTCTTGGATGGTCAACTTGAATTAGACTCTGATGGGTACATTGTGACCAAACCTGGCACCACAAAGACTAGTGTTGATGGGGTTTTTGCTGCTGGTGATGTGCAGGATAAGAAGTATAGGCAAGCTATTACTGCAGCTGGAACTGGGTGTATGGCAGCGTTGGATGCAGAACATTACCTGCAAGAGATAGGTTTGCAGGATGGTAGGAGTATTTAA 1230 0.5382 MGIFPNTFFTKARNLIGFGLASTAAAATIAASNSNVSSSSSSSFFSSSSSSSSSPSSTTSSTSSSDAGDTSSSDGEIVPRKILKTKVCIIGSGPAAHTAAIYAARAELKSVLFEGWMANGVAPGGQLTTTTDVENFPGFPAGILGAELMDRCREQSQRFGAEIVTETVTTVDFSERPLRVFTDSTTVEAESVIVATGAVAKRLNFDGAGDGPDGFWNRGISACAVCDGAAPIFRDRPLAVIGGGDSAMEEATFLTKFGSKVYVIHRRDKFKASKIMQGKLMRNPKIEVLWNSVVVGAYGDNKGRVLGGVKVKNVVTGVVSDLKVSGLFFAIGHEPATKFLDGQLELDSDGYIVTKPGTTKTSVDGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQEIGLQDGRSI 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03420 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 216 228 - -
Viun3g03420 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 285 301 - -
Viun3g03420 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 190 198 - -
Viun3g03420 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 145 155 - -
Viun3g03420 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 86 108 - -
Viun3g03420 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 233 257 - -
Viun3g03420 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 361 379 - -
Viun3g03420 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 124 139 - -
Viun3g03420 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 326 347 - -
Viun3g03420 409 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 85 400 - -
Viun3g03420 409 Gene3D - 205 336 IPR036188 -
Viun3g03420 409 FunFam Thioredoxin reductase 210 336 - -
Viun3g03420 409 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 223 245 IPR008255 GO:0016491
Viun3g03420 409 SUPERFAMILY FAD/NAD(P)-binding domain 83 398 IPR036188 -
Viun3g03420 409 MobiDBLite consensus disorder prediction 45 75 - -
Viun3g03420 409 Pfam Pyridine nucleotide-disulphide oxidoreductase 86 386 IPR023753 GO:0016491
Viun3g03420 409 PRINTS FAD-dependent pyridine nucleotide reductase signature 237 255 - -
Viun3g03420 409 PRINTS FAD-dependent pyridine nucleotide reductase signature 324 340 - -
Viun3g03420 409 PRINTS FAD-dependent pyridine nucleotide reductase signature 87 106 - -
Viun3g03420 409 PRINTS FAD-dependent pyridine nucleotide reductase signature 351 373 - -
Viun3g03420 409 PRINTS FAD-dependent pyridine nucleotide reductase signature 189 207 - -
Viun3g03420 409 NCBIfam thioredoxin-disulfide reductase 86 398 IPR005982 GO:0004791|GO:0005737|GO:0019430
Viun3g03420 409 Gene3D - 89 397 IPR036188 -
Viun3g03420 409 MobiDBLite consensus disorder prediction 45 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03420 Viun-Chr3 41211352 41214172 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03420 K00384 - gmx:100794363 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01696 2 26508289 26512374 Viun3g03420 3 41211352 41214172 PCT