Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03272 ATGGGTAAGTATCTTCTGTTATTAGCTCTCACTCTCCTCAACCTCGTACTATTCTCCACCCTTCATGTCTCAGCTGCACCTTCAACTACTTCTCCTGCAAAAATTGTTAGTGGGTTTCTCTCCAATGCCGTGCCTGCCGTCACTAAGTGGGTGTGGTCGCTCAAGGCCACCACCAAAACGGCGGTCTCGAGCAGGTCGATGATGAAGTTCGAGGGTGGATTCAGTGTGGAGACTGTGTTCGATGGGAGCAAGCTTGGGATCGAGCCTTATGCTGTGGAGGTGTTGCCCAATGGAGAGCTTCTCATTCTTGATTCGGCTAATAGTAACATTTATAGGATTTCCTCCTCACTTTCTTTATATAGCAGGCCTAAGCTGGTGGCAGGGTCAGCTGAAGGGTATTCAGGACATGTTGATGGGAAGCTCAGGGAGGCCAGGATGAACCACCCTAAGGGGATAACTGTTGACGACCGAGGAAATATCTATGTTGCAGATACTACAAATATGGCAATTAGGAAAATTAGTGATTCAGGGGTCACGACAATTGCTGGAGGAAAATGGAGCCGAGGAGGGGGGCATGTTGATGGACCAAGTGAAGAGGCTAAATTCTCTGATGACTTTGATGTGGTTTATGTTGGAAGTAGTTGTTCACTACTTGTCATAGACAGAGGAAACCGAGCCATCAGGGAGATCCAACTCCACTTTGACGATTGTGCCTATCAATATGGCAGTGGATTCCCACTTGGGATTGCAATGCTTGTGGGGGCTGGCTTCTTTGGTTACATGCTGGCATTACTGCAGCGAAGGCTTGGTACAATTGTAGCATCCCAGGACGCTCAGGTTCCGGTAATGGCAACATCTTCAGTTCCTTCAAGTCCATATCAAAAGCCGTTGAAATCTGTCAGGCCTCCTTTAATTCCATCATCAGAATATGAACCCGAGAAGCAGGAAGAGGGCTTCTTTGGATCCCTCGGGAAGCTTCTTGCGAATACTGGTGCATCAGTGGTGGAGATAATGGGAGGATTATTTCCTTCATTCAGACGAAAATCGCTAAGCCACCAGTTTCAAAGACAACCACTTCTCCAGCAACCTCAGAAGCAAGCAAATTCTTGGCCTGTGCAGGAAAGTTTCGTGATCCCTGATGAAGATGAACCTCCTTCAATCGACACAAGAGCTCCAACCCCTAGAAAAACCTATCCTTTCATGTCCAAGGATGCAGAGAAAATGCAACAACTTCGGCAAAGTCGTGCATTCTATAGTGGATGGGATGGAGATATGAATCAGCAGCAACAACAGTCACAACAGCAGCAACAGAAACACCATCATCGCCATCAGTACCGATCGGCAACCCCTCACACTTACTATGAGCAGAGCCATGAAACAACGAATGAGATAGTGTTTGGGGCAGTGCAGGAACAGGATAGGAGGCAGGAGTCTGTGGTTATCAAGCCTGTGAATTATGGGGAGCCACTGTATGACAGTCACAATGTTAGGTCCAGAATGAGTTTCATGGGCTATGGTGGCCACAGGTATTGA 1533 0.4749 MGKYLLLLALTLLNLVLFSTLHVSAAPSTTSPAKIVSGFLSNAVPAVTKWVWSLKATTKTAVSSRSMMKFEGGFSVETVFDGSKLGIEPYAVEVLPNGELLILDSANSNIYRISSSLSLYSRPKLVAGSAEGYSGHVDGKLREARMNHPKGITVDDRGNIYVADTTNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVIDRGNRAIREIQLHFDDCAYQYGSGFPLGIAMLVGAGFFGYMLALLQRRLGTIVASQDAQVPVMATSSVPSSPYQKPLKSVRPPLIPSSEYEPEKQEEGFFGSLGKLLANTGASVVEIMGGLFPSFRRKSLSHQFQRQPLLQQPQKQANSWPVQESFVIPDEDEPPSIDTRAPTPRKTYPFMSKDAEKMQQLRQSRAFYSGWDGDMNQQQQQSQQQQQKHHHRHQYRSATPHTYYEQSHETTNEIVFGAVQEQDRRQESVVIKPVNYGEPLYDSHNVRSRMSFMGYGGHRY 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03272 510 Gene3D - 42 231 IPR011042 -
Viun3g03272 510 MobiDBLite consensus disorder prediction 421 435 - -
Viun3g03272 510 PANTHER - 33 508 - -
Viun3g03272 510 Pfam NHL repeat 147 172 IPR001258 GO:0005515
Viun3g03272 510 SUPERFAMILY NHL repeat 76 233 - -
Viun3g03272 510 MobiDBLite consensus disorder prediction 421 449 - -
Viun3g03272 510 MobiDBLite consensus disorder prediction 376 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03272 Viun-Chr3 39703407 39707137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03272 - - gmx:100781836 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03272 3 39703407 39707137 Viun3g03272 3 39703407 39707137 ECH