Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03263 ATGGCACCTTTGCAACAAAAGCTACCCTTCTCATATCTACTCATCCTTTGCTTAGCCACTGTGGTTTCTTCACACAACAGACCTTTTACAGTTCCAAGTGTCACACGCTTGACGGATTCTTTTCCCACTGTCCCAGTTGATCAAGCTTTTTCTAAGGCCTTTGGGGCCTCCAGTGTCCAGTTTCTCAGCAATGGGTCCACGGCCACACTGGCTCTCGACAAAGTCTCAGGCTCAGGATTGGTATCACAAAGAAGATACAACTATGGATTCTTCAGTGCTGCAATCAAATTGCCCTCTGGTTTGTCACCTGGAGTTGTTGTTGCCTTTTATCTGTCAAATGCAGATAAATTCCCTCACAACCATGATGAAATAGACATTGAAATTCTGGGTCATGATAAAAGAAATGACTGGGTTATTCAAACAAATGTGTATGCCAATGGAAGTGTCAGCACAGGGAGAGAAGAGAAATTCTATTTCTGGTTCGACCCAACACAGCAGTATCATCTCTACAGCATCTTGTGGAACAGTTATCACACAGTGTTCTTAGTGGACAATATTCCAGTGAGGGAATTCATACATAGCAACACATATCCTTCTGTTTATCCATCAAAACCAATGTCGGTGTATGCCACAATATGGGATGGTTCAGAATGGGCTACTCATGGAGGCAAATACCCAGTTAACTACAAGTATGCACCATTTGTTGCTTCATTTGCACAAGTAAAACTGAGTGGCTGCATATCTGACCCCACTGCACCAGTTTCTGCATGTGCTAAGGTCAATCCTTCAGCTCAAGACCCAATCAATGGACCAGAGTTTACTAAGCTATCACAGCAGCAAGTAGCAGCTATGGATTGGGCAAGGAGGAAACTCATGTTTTACTCTTACTGCAATGACAGACCCAGATTCAAAGTCATGCCACCAGAATGCCACTAA 936 0.4348 MAPLQQKLPFSYLLILCLATVVSSHNRPFTVPSVTRLTDSFPTVPVDQAFSKAFGASSVQFLSNGSTATLALDKVSGSGLVSQRRYNYGFFSAAIKLPSGLSPGVVVAFYLSNADKFPHNHDEIDIEILGHDKRNDWVIQTNVYANGSVSTGREEKFYFWFDPTQQYHLYSILWNSYHTVFLVDNIPVREFIHSNTYPSVYPSKPMSVYATIWDGSEWATHGGKYPVNYKYAPFVASFAQVKLSGCISDPTAPVSACAKVNPSAQDPINGPEFTKLSQQQVAAMDWARRKLMFYSYCNDRPRFKVMPPECH 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03263 311 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 39 238 IPR000757 GO:0004553|GO:0005975
Viun3g03263 311 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 46 310 IPR044791 GO:0004553
Viun3g03263 311 SUPERFAMILY Concanavalin A-like lectins/glucanases 52 310 IPR013320 -
Viun3g03263 311 PIRSF EndGlu_transf 9 311 IPR016455 GO:0010411|GO:0016762|GO:0042546
Viun3g03263 311 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 274 310 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Viun3g03263 311 Gene3D - 31 310 - -
Viun3g03263 311 Pfam Glycosyl hydrolases family 16 52 230 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03263 Viun-Chr3 39518964 39520580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03263 13 311 Glycoside Hydrolase AT1G10550 62.376 6.41e-145 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03263 K08235 - gmx:100778993 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03263 3 39518964 39520580 Viun3g03263 3 39518964 39520580 ECH