Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03260 ATGGAGGAGCAACGACAGCAACCGCAGGCTCCTCTTTCCATTGACTGGAACCGACAATTTCAACAGGACTCGCCGCCGAGGGAGGTCGTCATCGTGCCGTCCTCCACCATGGCCTCTGATCAGGACGACCTCAGCGCTATTCCCGATCACAAGCTAAAGGAGTCGATTCAGAGCAAGAAGAGAACACTCGACGTTACTGGCAAGAATTTGCCCGACAATGGCGCCAAGCTTCGCGCTACCATCGACCGGTACCAGCAGGAACTTAGTCGCCGGGAATCGATGCGTCTTAGCAAGGAAGTTGATGGGGACCAGAAGCCGCAGCCCGAACAAACTACAAGCTCAAGTGCTATTACCAAGGGTGTGTCTAATGACATGAGAGAAGAGGCTTTGTCATCTCAAGTTCAACCACTATCCACTTTTACATCTTGCTTTTTTAAAAAAATGGAAGATAGTACTAGTTGTACAGCTGCCGAAGCATTTAAAAAAGAGAAGTCACAATTCAAACATTGTGAGAACCAGAAAATACAAGAAAATGCAGCTTCTGATGCATTTGGAAAAGAGACGTCACATGTCAATCACTCTGACAACCGAAAAATAACAAACCGTGGAACCCCTAGAAGAAGAAAGAGACATCGTTCATCATCAAGACAATTGCCGTTTCAGTGTCCTAGTAAACTTTCTAAACATGATACTTTTAGTGATGATAAAACTTGTAGAGCAACTTCCACTTTTTCTCTGCGGAATATTGGGAGAAATCTGTCAAGATGCTACCCAAAAGTATCCTTATTTACTCGTTACCCACATGGTAGGAAGGACGTTTCTGAGGCAATTCAATTAGATGGCTCAAGGTCCAAGAAGGGTCAGCCCATTGTTCTTGATGTTGACGATGATGACGATGAGGCTCATATTGTGGAGAAAACTGAAAATCAATTTCCTGAATACCTGAAAGACGCTAAGATCTATTTTCCATCAAGAGATGATCCAGAGTGCGTAGAAATTTGTTACAAAGATACAGATTGCCTTGCCCCTGAAGGCTATTTAACATCAACAATAATGAACTTCTACATTCAATATTTGCAGCAGCAAGTATTGTTGACAACTGACTACCATTTTTTCAATACATATTTCTACAAGAAGCTTAAAGAAGCTGTTTCATACAAGCAAAGTGATCGAGATGTGATCTTTGCAAAGTTCAGAAGATGGTGGAAGGGTGTAAATATTTTTCAGAAGGCATATGTTTTGATTCCAATACACGAGGACCTTCACTGGAGCTTGATCATTATTTGTATCCCAGACAAAGAAGATGAATCGGGGCCAATCATACTTCATTTGGATTCTTTGGGTCTTCACTCTAGTAAATCAGTTTTTGATAATATTAAAAGCTATTTGATTGAAGAAAAGAACTATATGGATCAGGAAGATGTGTCTTCAAATGTTTCAATTGCAGACAGAATATGGAAGTGCCTTCCTCGTAGAATTGAATGTCAGATCATTGCGGTTCCCCAACAGAAGAACGAGTATGACTGTGGTCTTTTTGTATTGTACTTCATTGAGCGTTTCATGGAGGAGGCACCTGAGAGACTGAAAAAGAAAGATTTGGCAATGTTTGGAAAACGATGGTTCAAACCCGAAGAGGCTTCCAATTTGAGAGTGAAAATCCGTAAATTGCTTGTAGAAAAATTAGAGAATTCAATGATGGATAATTGTGACTTAGAATCTTCTTCACCTTCATCATCTGGTGGCCTTGCAACTGAGTGTGTTGAGTCCGCGAAGGATTCTATGGCGTAA 1788 0.4133 MEEQRQQPQAPLSIDWNRQFQQDSPPREVVIVPSSTMASDQDDLSAIPDHKLKESIQSKKRTLDVTGKNLPDNGAKLRATIDRYQQELSRRESMRLSKEVDGDQKPQPEQTTSSSAITKGVSNDMREEALSSQVQPLSTFTSCFFKKMEDSTSCTAAEAFKKEKSQFKHCENQKIQENAASDAFGKETSHVNHSDNRKITNRGTPRRRKRHRSSSRQLPFQCPSKLSKHDTFSDDKTCRATSTFSLRNIGRNLSRCYPKVSLFTRYPHGRKDVSEAIQLDGSRSKKGQPIVLDVDDDDDEAHIVEKTENQFPEYLKDAKIYFPSRDDPECVEICYKDTDCLAPEGYLTSTIMNFYIQYLQQQVLLTTDYHFFNTYFYKKLKEAVSYKQSDRDVIFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLIIICIPDKEDESGPIILHLDSLGLHSSKSVFDNIKSYLIEEKNYMDQEDVSSNVSIADRIWKCLPRRIECQIIAVPQQKNEYDCGLFVLYFIERFMEEAPERLKKKDLAMFGKRWFKPEEASNLRVKIRKLLVEKLENSMMDNCDLESSSPSSSGGLATECVESAKDSMA 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03260 595 Pfam Ulp1 protease family, C-terminal catalytic domain 346 545 IPR003653 GO:0006508|GO:0008234
Viun3g03260 595 MobiDBLite consensus disorder prediction 182 235 - -
Viun3g03260 595 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 28 574 - -
Viun3g03260 595 MobiDBLite consensus disorder prediction 83 105 - -
Viun3g03260 595 MobiDBLite consensus disorder prediction 569 584 - -
Viun3g03260 595 MobiDBLite consensus disorder prediction 1 24 - -
Viun3g03260 595 Gene3D - 369 497 - -
Viun3g03260 595 ProSiteProfiles Ubiquitin-like protease family profile. 331 520 IPR003653 GO:0006508|GO:0008234
Viun3g03260 595 SUPERFAMILY Cysteine proteinases 321 559 IPR038765 -
Viun3g03260 595 MobiDBLite consensus disorder prediction 44 61 - -
Viun3g03260 595 Gene3D - 322 558 - -
Viun3g03260 595 MobiDBLite consensus disorder prediction 1 119 - -
Viun3g03260 595 MobiDBLite consensus disorder prediction 569 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03260 Viun-Chr3 39479665 39497887 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03260 K16287 - gmx:100790705 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03260 3 39479665 39497887 Viun3g03260 3 39479665 39497887 ECH