Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03240 ATGCGATTGAATATAAAGCGAACCATCATCTTCAGAATCTGTCTCAGATATCGAATGGCGGAGAACAAGGACCTCGAAACCGCCATCAGAAGGCTCGCCTCTGTCAAGAACCACCTCCTTTCCGCTCCCGCAGCGTCCCCTGAACTCACCTTGACCCGCACTTCCACTTCCGACAACAGCTTCGGCCGCGTTCACGGTCACGTTCCTTCTCACGACGTCGTTTGGAAGACCGCTTCCGATGACTTCACAGACATTGTGTACGAGAAGGCCGTCGGGGAAGGAATTGCCAAGATAAGTATTAATAGGCCTGAGAGAAGGAACGCGTTCCGTCCCAAAACGGTGAAGGAGCTCATGCGTGCTTTCACTGACGCCAGGGATGATTCATCTGTTGGGGTCGTCATTCTCACTGGCAAGGGAACCAAGGCATTTTGTAGTGGTGGAGACCAGGCTTTGAGGACCGACGATGGCTATTCTGATGACGGAGGTTTTAGTAACCTTAATGTGCTAGACTTGCAGGTGCAGATACGCCGCCTCCCTAAGCCAGTGATTGCAATGGTAGCAGGTTATGCTGTTGGTGGAGGGCATATATTACATATGGTCTGTGACCTAACTATTGCAGCAGATAATGCTATCTTTGGCCAAACTGGTCCTAAGGTAGGAAGCTTTGATGCTGGTTATGGAAGTTCTATCATGTCTCGTTTGGTAGGTCCAAAAAAAGCGCGTGAAATGTGGTTCCTCACAAGGCTTTATGATGCTGTTGAAGCAGAGAAAATGGGTCTTGTCAACACTGTTGTACCTCTTGAGAGTTTGGAGAAAGAAACGATAAAATGGTGTCGGGAGATACTGAGTAACAGTCCAACTGCTATACGGGTCCTCAAGTCAGCTCTTAATGCAGTGGATGATGGACATTCTGGACTTCAGGAACTTGGGGGAAATGCAACACTGATATACTATGGCACGGAGGAAGCTAAAGAGGGGAAGACTGCATATTTGCAACGTAGACGCCCTGATTTTTCTAAGTTCAAACGGCGACCTTAA 1038 0.4846 MRLNIKRTIIFRICLRYRMAENKDLETAIRRLASVKNHLLSAPAASPELTLTRTSTSDNSFGRVHGHVPSHDVVWKTASDDFTDIVYEKAVGEGIAKISINRPERRNAFRPKTVKELMRAFTDARDDSSVGVVILTGKGTKAFCSGGDQALRTDDGYSDDGGFSNLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRLYDAVEAEKMGLVNTVVPLESLEKETIKWCREILSNSPTAIRVLKSALNAVDDGHSGLQELGGNATLIYYGTEEAKEGKTAYLQRRRPDFSKFKRRP 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03240 345 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 183 203 IPR018376 GO:0003824
Viun3g03240 345 SUPERFAMILY ClpP/crotonase 72 340 IPR029045 -
Viun3g03240 345 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 67 282 - -
Viun3g03240 345 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 75 344 IPR010198 GO:0008935|GO:0009234
Viun3g03240 345 NCBIfam 1,4-dihydroxy-2-naphthoyl-CoA synthase 82 341 IPR010198 GO:0008935|GO:0009234
Viun3g03240 345 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 20 345 - -
Viun3g03240 345 Pfam Enoyl-CoA hydratase/isomerase 93 339 IPR001753 -
Viun3g03240 345 CDD crotonase-like 85 281 - -
Viun3g03240 345 Gene3D - 66 282 - -
Viun3g03240 345 Gene3D - 283 333 IPR014748 -
Viun3g03240 345 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 283 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03240 Viun-Chr3 39215698 39219242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03240 19 345 Acyl Lipid Metabolism Gene Families AT1G60550 75.668 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03240 K01661 - gmx:100782743 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03240 3 39215698 39219242 Viun3g03240 3 39215698 39219242 ECH