Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03217 ATGGAAACAGCAGTGATGCACTTTGTTTACTATTTGTTGATATCAATTTGTTGGTGCAGTGGCAACATGGGGCAGGCTATTGAATTACCTAACTACACACCCATACTCTCTCGGTCAGATTTTCAGATTAGACTCTACAATGAATCCACATGGGTATCAGCCCGTGTTTCTGGAACTTCCTTCGACCAGTCCTACAAAATTGGATTTCAAAGGCTATACCAGTATATCCATGGCGCGAATTCCAATTCTTCAAAAATTGCATTTACTGCTCCAGCCTTAACGAGTGTGCCGTCTTCATCGTCACCCTCTGGGAATGCCTATATTGTAAGAATATTCATATCAACTCGTTTTCATGGGAAACCTCCGTTGCCCAATCCTGAACTCAAGCTGCGGATAGAGAAGTGGAAAAGTCAGTGCATAGCAGTTAGGAAGTTCGGTGGGTATGCGAATGATGATGATATTAACAAAGAAATCGAAGCTCTTCTAACTACCCTAAACAACCAATCCATAACAATACAAGATACCGACTCCTATATCATTGCCAACTACAATGCTTCCTCTCATAATACTACTCAACGCTTGAATGAAGTGTGGATAAATGTGTCGGGAATTGGGACCCAGTGCTGA 627 0.4195 METAVMHFVYYLLISICWCSGNMGQAIELPNYTPILSRSDFQIRLYNESTWVSARVSGTSFDQSYKIGFQRLYQYIHGANSNSSKIAFTAPALTSVPSSSSPSGNAYIVRIFISTRFHGKPPLPNPELKLRIEKWKSQCIAVRKFGGYANDDDINKEIEALLTTLNNQSITIQDTDSYIIANYNASSHNTTQRLNEVWINVSGIGTQC 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03217 208 PANTHER HEME-BINDING PROTEIN-RELATED 25 200 IPR006917 -
Viun3g03217 208 Gene3D Regulatory factor, effector binding domain 26 204 IPR011256 -
Viun3g03217 208 Pfam SOUL heme-binding protein 28 199 IPR006917 -
Viun3g03217 208 FunFam Heme-binding protein 2 27 206 - -
Viun3g03217 208 SUPERFAMILY Probable bacterial effector-binding domain 22 201 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03217 Viun-Chr3 38914659 38915462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03217 - - gmx:100500604 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03217 3 38914659 38915462 Viun3g03217 3 38914659 38915462 ECH