Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02914 ATGAGCATCTCCACCACGCTTTCCTTTGACCCTCTCTTCAGCTTCAATCACTGTGTCAACAGAGAAAGAGAACCCTCCATTCACAGTTCTAAGCCAAAGCTATTCTCTCTTACTTCCTCCTCCACTCTCACCCTCTTCAACTCCAGCAACAACAACTGTAGCTATAACTTCGCCTCTTGGAAACCCCACAAGTTCCACACTCCAAAGTTTGAAGCTTTTGCTACAAACACTGATACCCTCGAGTCCCTTCAGTCTTCTGATGTCTTGTTCGATCAGACGTTCCCCATCAACAGAACTGAACTGGTGGAGGGAAAGATCTTTGTAAGATTGGATCATGGGAAGGATTTGGGAAATTGGGAGCTTACAGTGGGTTGCAATCTAACAGGGAAATGGATTCTTCATTGGGGAGTTTCTCGTGTGGATGATGTTGGAAGTGAGTGGGATCAACCTCCGCGGGATATGATACCACCTGGATCTGTTCCTATTAAGGACTATGCAATAGAAACACCTATGCTGAAATCATTGTCGTCTGCTGAAGGAGATGCTTTACATGAAGTCAAGATCGATCTTAAACCCAACAATGATATTTCAGCGATTAATTTTGTTCTCAAGGATGAGGAAACTGGTGCATGGTATCAACACAAAGGAAGAGATTTCAAGGTTCCTCTGGTTAATTACCTTAAGGAGGATGCTAATATAATTGGACCCAAAAAAGGTTTTAGTTTGTGGCCAGGGGCCTTGGGGCAGATATCTAACATTCTCCTCAAGTCAGATGCAACGCATGACAAGGTTCAAGATGGCGACACTGGATCCAGAAATACACAAGTGGAAAATAGTCAACTAGAAGGTTTCTATGTAGAGCTGCCTATTACCAAGGAAATTATTGTCGATAACTCTATCACTGTCTCCATTACGAAGTGCTCTGAAACGGCTAAGAATAATTTATATCTAGAAACAGATATACCTGGAGATATTCTCCTTCATTGGGGGGTTTGTAGGGATGATTTGAGGTGGTGGGAAATTCCACCTGCCCCTCATCCACCAGAGACAATAGCATTTAAGGACAGAGCATTAAGAACTAAGTTACAGTCAATAGACAATGGAGTGGGAAGTTCATTGCAGCTCTCTTTGGGAGAAGAATTTTCTGGATTTCTTTTTGTTTTAAAGCTAAATGACGGTACTTGGATAAATGACATGGGAGATGACTTTTACATTTCTCTCCCAAGATCTAGTAGCTTAATTATTGGCAAGAAGGATGACCAATTTGAGGGTGTGCAGAGGGAAGTGACGGAAGTCACTGAAGAGGCAGGTCAAGAGGAATCTGCATCTACATTTACTGATGAAATAATCAATGAAATAAGGCATTTGGTGACAGATATTTCCTCTGAGAAGAATAGAAAGACAAAATCCAAAGAAGCACAAGAATCCATTCTTCAAGAAATTGAAAAGCTAGCTGCAGAGGCCTACAGTATCTTCAGAAGTTCCGTTCCAACTTTCTCAGAGGAAACTATTGTGGAATCTGAGGCTGCTGTTGAATCCAAGACAGTAATATTTCCTGAATTGCCTCCACAAATATCCTCCGGAACAGGCACAGGGTATGAAATACTATGCCAAGGGTTTAATTGGGAATCCCATAAATCTGGAAGATGGTACATGGAGCTTAAAGAGAAAGCTGCAGAACTGGCATCGTTTGGCATTACTGTGATATGGTTACCACCCCCGACAGAATCTGTTTCTCCTGAAGGATATATGCCAAAGGATTTATATAATTTAAATTCTAGATATGGAACTATTGATCAACTGAAGGATGTGGTAAAAAGTTTTCATGAAGTTGGAATCAAAGTGCTTGGAGATGTTGTTTTAAATCACCGCTGTGCTCACTATAAGAATCCAAATGGTATTTGGAACTTATTTGGAGGTCGTCTCAACTGGGATGAGCGTGCAATTGTAGCTGATGATCCACATTTTCAGGGGAGGGGCAACAAGAGTAGCGGGGACAATTTTCATGCTGCTCCAAACATTGATCACTCGCAGGAATTTGTGAGAAAGGATCTTAAAGAATGGTTATTGTGGTTGAGGAGAGAAATCGGGTATGATGGGTGGAGGCTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTAAAGGACTACCTGGAAGCAAGTGAGCCATACTTTGCTGTAGGAGAGTATTGGGATTCTCTTAGTTATACATATGGTGAAATGGATCATAATCAAGATGCACACAGGCAAAGGATCGTTGACTGGATCAATGCTACTGGTGGTACTGCTGGTGCATTTGATGTTACAACCAAAGGAATTCTTCACTCTGCTTTGGAAAGATGTGAATACTGGCGCTTGTCAGATCAAAAGGGAAAGCCCCCTGGTGTTCTTGGATGGTGGCCATCTCGTGCTGTTACTTTTATAGAAAATCATGATACTGGTTCTACCCAGGGTCATTGGAGATTTCCCAGTGGAAAAGAAATGCAAGGATATGCTTACACTCTTACTCACCCAGGAACTCCATCAGTGTTCTATGACCACCTTTTTTCTCACTACAAAACTGAAGTATCAACACTTCTCTCTATCAGAAAGCGAAACAAGATCCACTGCAGGAGTACAGTTAAAATTTGCAAGGCAGAAAGGGATGTTTATGCAGCTTTGATAGATGAAAAAGTTGCTATGAAGATTGGACCTGGTCAATTTGAACCACCCAGTGGATCCCAAAATTGGTCCTCAGCTTTGGAGGGAAGGGACTACAAGATTTGGGAGGCATCGTAA 2778 0.4194 MSISTTLSFDPLFSFNHCVNREREPSIHSSKPKLFSLTSSSTLTLFNSSNNNCSYNFASWKPHKFHTPKFEAFATNTDTLESLQSSDVLFDQTFPINRTELVEGKIFVRLDHGKDLGNWELTVGCNLTGKWILHWGVSRVDDVGSEWDQPPRDMIPPGSVPIKDYAIETPMLKSLSSAEGDALHEVKIDLKPNNDISAINFVLKDEETGAWYQHKGRDFKVPLVNYLKEDANIIGPKKGFSLWPGALGQISNILLKSDATHDKVQDGDTGSRNTQVENSQLEGFYVELPITKEIIVDNSITVSITKCSETAKNNLYLETDIPGDILLHWGVCRDDLRWWEIPPAPHPPETIAFKDRALRTKLQSIDNGVGSSLQLSLGEEFSGFLFVLKLNDGTWINDMGDDFYISLPRSSSLIIGKKDDQFEGVQREVTEVTEEAGQEESASTFTDEIINEIRHLVTDISSEKNRKTKSKEAQESILQEIEKLAAEAYSIFRSSVPTFSEETIVESEAAVESKTVIFPELPPQISSGTGTGYEILCQGFNWESHKSGRWYMELKEKAAELASFGITVIWLPPPTESVSPEGYMPKDLYNLNSRYGTIDQLKDVVKSFHEVGIKVLGDVVLNHRCAHYKNPNGIWNLFGGRLNWDERAIVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLKEWLLWLRREIGYDGWRLDFVRGFWGGYVKDYLEASEPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIVDWINATGGTAGAFDVTTKGILHSALERCEYWRLSDQKGKPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPSGKEMQGYAYTLTHPGTPSVFYDHLFSHYKTEVSTLLSIRKRNKIHCRSTVKICKAERDVYAALIDEKVAMKIGPGQFEPPSGSQNWSSALEGRDYKIWEAS 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02914 925 Gene3D - 868 924 IPR013780 -
Viun3g02914 925 PANTHER ALPHA-AMYLASE 504 924 - -
Viun3g02914 925 CDD AmyAc_arch_bac_plant_AmyA 535 874 - -
Viun3g02914 925 Pfam Alpha amylase, catalytic domain 561 821 IPR006047 GO:0005975
Viun3g02914 925 SMART alpha-amyl_c2 864 924 IPR012850 GO:0004556|GO:0005509|GO:0005975
Viun3g02914 925 PRINTS Alpha-amylase signature 802 814 IPR006046 GO:0004556|GO:0005975|GO:0043169
Viun3g02914 925 PRINTS Alpha-amylase signature 698 709 IPR006046 GO:0004556|GO:0005975|GO:0043169
Viun3g02914 925 PRINTS Alpha-amylase signature 612 623 IPR006046 GO:0004556|GO:0005975|GO:0043169
Viun3g02914 925 SMART aamy 534 869 IPR006047 GO:0005975
Viun3g02914 925 Pfam Alpha-amylase C-terminal beta-sheet domain 865 923 IPR012850 GO:0004556|GO:0005509|GO:0005975
Viun3g02914 925 SUPERFAMILY (Trans)glycosidases 532 851 IPR017853 -
Viun3g02914 925 Gene3D Glycosidases 534 867 - -
Viun3g02914 925 SUPERFAMILY Glycosyl hydrolase domain 868 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02914 Viun-Chr3 35227694 35237599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02914 70 925 Glycoside Hydrolase AT1G69830 67.407 0.0 1201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02914 K01176 - gmx:100788193 1707.58