Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02273 ATGTTCAACATTAGAATTGTTCTCGGTGTTGCCACGTTTCTGATTTTCAACCATGCGGAATCAGCTTCAGAACACAGTCTGCCTCGCGTTGTCACTCCACTTCCTGCGCCTAAGATAACCAACCTTCCTCAGTTTCAAGGACAGCACAAGGAGAGTTTGTACTGGGGAACGTATCGTCCTCAGGTCTATCTGGGAGTTCGTGCCAGGACTCCAAAATCTTTGATTGCTGGATTGATGTGGATTGTAGTGAAGAATAGCAAATATCACTTGCGGCATGTGTGCAAACATGAAGATGACCTAAGTACTTATGGTTGGACTAAGCACAATGGACGTGATTTTGGACATCAAGTGCTGCTTGACCAGGGCGTGGCATTAACTACTGCCTTTTTAAAATCTAAAGAGGAAGGCAGTGGCTATGGAGGGGATTGGGCAATTCGAATTAGTGTGCAAGCTGATAAGTCCAAGTGGAATGAGGAATTTGGAACAGGTGCCCATCTTTTTTTCTATATAGCAGACGAAGGTGCTAATGCTCTAAATTTAAGTAGACAAAACTTAAACACTCTTGAGGATTCTTTACTGGCATCTGGGTCTCATGCGGACATTGGAGACTGGCAGCTTCATCTGAAATCAATGGATGATTTGGAGCTGCATTATTCTGGATTTCGCACTCCTCATTTTCACAATTTGTCTGATCTTGTCGAGGAAAATCTTTCATCACAAATAAGAAAGAATGCTCCACCGCTGCTATCTGACTCATCGGATGATTCTCCAAATGTATTAGTTTTTCAGATTATTGGTGGATTTTCTTTCACAACAGATGTTATATTTATTTCTGGAACTCATTCAGAAAGTTCAAGAGTGGAAGAGCGTGTCAGTAGTCTTTCAGGAACCTCATTGTACAATCAACTGAAATATAAAGAGAAAGCATTTGATGAAAAGTTTGAAGAAATTTTCAATTTAGAAGAGAAGGTGGATTCAGAATCCATATCTGTTGGTAAGGCAGCTGTGGGAAACTTATTAGGTGGCATCGGCTACTTCTATGGTCAGTCAAAAATTGCTGTTTCAAGAACCGACAATCTCCGAGATCATGTTAATTATATATCATATTGGCCTGCTGAGCTTTACACAGCAATACCATGTCGACCTTCCTTTCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTATAATCTGGCGTTGGGATATCCATATTTCACTGGACATCATTGGACACTGGTTAGATTTGATGAATGCTGATGGATGGATACCTCGTGAACAAATTCTCGGAGATGAAGCACTGAGCCGGGTCCCTGAGGAATATGTTCCTCAGCATCCTACTAATGGAAATCCTCCAACTCTGTTTTTAGCATTAAGCGAGATAATAAATGGCTTGAAGAATAATGAGTTTACTGCAATGGATAAAACTGACATCCTTGTATTCCTGGACCGTGCCTTTGTTCGATTAGAAGCATGGTTCCAATGGTTCCATACAACTCAATCAGGGAAACAGATGAGCAGCTACTACTGGCATGGACGGGACAATAAGACCATATATGAATTAAATCCCAAGACCCTGTCCTCTGGATTTGATGATTATCCGCGTGCTTCACACCCAACTGCTGACGAACGCCATGTGGATCTTAGATGTTGGATACTACTTGCAGCAGAATGTTTGCATTCCATTGAAGAGTTATTGTATAAGGAAACTAAACCTGGCATGAATTATGGTTCCACTGCCCAATTGCTATCAGATATCGAGTTACTGAACCAGATGCATTTTGATGATGCATATGGAGCTTATTTTGACTTTGGGAATCATACAGAAAAGGTTCAACTTAAATGGAAAGATGTGGATATAGGACACAACCATGCTGATCGCCAACTTGTCAGGGATGTTTTAGAGAGGCCTGTGTTGAGATTGGTTCCTCACATTGGTTATGTTAGCCTATTCCCATTCATGGGGAAGATCATTCCATCTGGATCATGGATTCTGGAAAAGCAGCTTCAACTCATTTCAAATGATAGCCTCTTTTGGACTGACTATGGACTACGATCGCTTGCCACCACAAGAGTCTGA 2082 0.4131 MFNIRIVLGVATFLIFNHAESASEHSLPRVVTPLPAPKITNLPQFQGQHKESLYWGTYRPQVYLGVRARTPKSLIAGLMWIVVKNSKYHLRHVCKHEDDLSTYGWTKHNGRDFGHQVLLDQGVALTTAFLKSKEEGSGYGGDWAIRISVQADKSKWNEEFGTGAHLFFYIADEGANALNLSRQNLNTLEDSLLASGSHADIGDWQLHLKSMDDLELHYSGFRTPHFHNLSDLVEENLSSQIRKNAPPLLSDSSDDSPNVLVFQIIGGFSFTTDVIFISGTHSESSRVEERVSSLSGTSLYNQLKYKEKAFDEKFEEIFNLEEKVDSESISVGKAAVGNLLGGIGYFYGQSKIAVSRTDNLRDHVNYISYWPAELYTAIPCRPSFPRGFLWDEGFHQLIIWRWDIHISLDIIGHWLDLMNADGWIPREQILGDEALSRVPEEYVPQHPTNGNPPTLFLALSEIINGLKNNEFTAMDKTDILVFLDRAFVRLEAWFQWFHTTQSGKQMSSYYWHGRDNKTIYELNPKTLSSGFDDYPRASHPTADERHVDLRCWILLAAECLHSIEELLYKETKPGMNYGSTAQLLSDIELLNQMHFDDAYGAYFDFGNHTEKVQLKWKDVDIGHNHADRQLVRDVLERPVLRLVPHIGYVSLFPFMGKIIPSGSWILEKQLQLISNDSLFWTDYGLRSLATTRV 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02273 693 Pfam Glycosyl hydrolase family 63 C-terminal domain 296 691 IPR031335 -
Viun3g02273 693 Gene3D - 40 321 IPR038518 -
Viun3g02273 693 FunFam Mannosyl-oligosaccharide glucosidase GCS1 40 321 - -
Viun3g02273 693 Gene3D - 322 692 IPR012341 GO:0005975
Viun3g02273 693 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 8 691 IPR004888 GO:0004573|GO:0009311
Viun3g02273 693 SUPERFAMILY Six-hairpin glycosidases 305 689 IPR008928 GO:0005975
Viun3g02273 693 Pfam Glycosyl hydrolase family 63 N-terminal domain 52 211 IPR031631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02273 Viun-Chr3 19930173 19942445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02273 24 691 Glycoside Hydrolase AT1G24320 56.353 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02273 K01228 - gmx:100795161 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02273 3 19930173 19942445 Viun3g02273 3 19930173 19942445 ECH