Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02220 ATGTCTGCTGCTGTTTCCGCAACCAAGGATGTTCCCTTCAATTCTCAGTTGGAGGAAGACCTTAAAAACAAAGGAACCAAAAACAAGGTTGTCGGTGAAGCAGACCGTGTTCCTTACACTGAGGATGCTGAAGGAACCGAGTCAGAGGCAGAGGAAGACCCCAACTTGAAATTGGATCTTGGCCCTCTGTTTTCCCTCAAAGAACAGATTGAGAAAGACAAAGATGATGAAAGTTTGAGAAAATGGAAGGAACAGCTTCTGGGAAGTATTGATGTGTCTGCTGTTGGAGAGAACAAAGAACCAGAAGCGAAGATAGTGAGCCTCACCATAATATGCCCAGGGAGGCCTGACCTCATTCTACCAATTCCATTTACTTCTGATGCTAAGAAGAGTATCTTCATTCTGAAGGAAGGAAGTCAATACCGCTTGAAATTCTCCTTCACTGTCTCCAACAACATTGTTTCCGGCCTCAAATACTCCAATGTTGTTTGGAAAACTGGGGTTAGAGTGGACAACACCAAAAAAATGTTGGGAACTTACAGCCCAAGGCAGGAACCATATACGTATGAATTGGAAGAAGAAACTACCCCTTCAGGGTTATTCGCTAGGGGAACCTATTCAGCGAGAACCAAGTTTGTAGATGATGATCGCAAATGCTACTTGGACACAAGTTACTACTTTGAAATTCAGAAGAGTTGGCCTACAACCATTTAA 714 0.4328 MSAAVSATKDVPFNSQLEEDLKNKGTKNKVVGEADRVPYTEDAEGTESEAEEDPNLKLDLGPLFSLKEQIEKDKDDESLRKWKEQLLGSIDVSAVGENKEPEAKIVSLTIICPGRPDLILPIPFTSDAKKSIFILKEGSQYRLKFSFTVSNNIVSGLKYSNVVWKTGVRVDNTKKMLGTYSPRQEPYTYELEEETTPSGLFARGTYSARTKFVDDDRKCYLDTSYYFEIQKSWPTTI 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02220 237 Pfam RHO protein GDP dissociation inhibitor 46 231 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Viun3g02220 237 SUPERFAMILY E set domains 44 234 IPR014756 -
Viun3g02220 237 MobiDBLite consensus disorder prediction 1 54 - -
Viun3g02220 237 Gene3D Coagulation Factor XIII, subunit A, domain 1 57 235 IPR024792 -
Viun3g02220 237 MobiDBLite consensus disorder prediction 15 43 - -
Viun3g02220 237 PRINTS RHO protein GDP dissociation inhibitor signature 170 185 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Viun3g02220 237 PRINTS RHO protein GDP dissociation inhibitor signature 153 169 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Viun3g02220 237 PRINTS RHO protein GDP dissociation inhibitor signature 212 229 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Viun3g02220 237 PANTHER RHO GDP-DISSOCIATION INHIBITOR 45 234 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Viun3g02220 237 FunFam Rho GDP-dissociation inhibitor 1 56 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02220 Viun-Chr3 18861485 18863292 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02220 K12462 - gmx:100806852 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03484 1 41616433 41617988 Viun3g02220 3 18861485 18863292 PCT