Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02147 ATGGCTCCTTTTGCAATTGCAACATTGGCCACTTCTCACACCTGCATCATCCCAAAGCCTTCGAATTTGAAGGTTCCAATTCGCTGCTCCGCGACTGCTTCTTCTCCTTCTTCGATTTCCACTCGATCAAAAGCCTCTGACTTTGATTTGAGGACATATTGGGCTTCCCTAATGGTGCAGATCAATCAGAAGCTCGATGAAGCCATTCCAGTTCAGTTTCCTTCGCAGATATATGAAGCTATGAGGTATTCAGTCCTGGCCAAGGGTGTCAAGCGAGCCCCACCTGTTATGTGCATCTCTGCATGTGAACTCTTTGGGGGCAGCCGCCTTGCTGCCTTCCCTACTGCCTGCGCCCTTGAAATGGTTCATGCAGCTTCATTGATACATGATGATCTTCCCTGCATGGATGACTCCCCGTCACGCCGTGGGCAACCTTCAAACCATACCATCTATGGTGTTGACATGGCAATTCTTGCTGGTGATGCACTCTTTCCCCTTGGATTTCGCCACATTGTTTCACAGACTCCATCTGACCTTGTACCAGAGCCCAATCTCCTTCGTGTGATTGCTGAGATGGCTCGCTCTGTAGGCTCCACTGGTATGGCTGCAGGGCAGTTCCTGGACCTTGAAGGAGGATCCAATGCAGTTGAATTTATTCAAGAGAAAAAGTTTGGTGAAATGGGAGAGTGTTCTGCAGTGTGTGGAGGATTGTTGGCTGGAGCTGAAGATCATGAGATAGAGAGACTGAGGAGGTACGGGAGAGCTGTTGGGCTATTGTATGCAGTTGTGGATGATATTCTGGAAGATAGATTGAAATCTGAGGGAGGTGTTGACAGGAAAAACAAGGGCAAGAGTTATGCAGAGGTTAATGGAGTAGAAAAGGCAATAGAAAAAGCTGAAGAGCTCAGAGAAACGGCCAAGGAAGAATTGGATGGATTTGAGAAGTACGGGGAGCGAGTCTTTCCTCTCTACAGTTTTGTGGATTATGCATTTGATAGAAGCTTCAGTGTTCTTGATGATGCTAGTGGATAA 1032 0.4738 MAPFAIATLATSHTCIIPKPSNLKVPIRCSATASSPSSISTRSKASDFDLRTYWASLMVQINQKLDEAIPVQFPSQIYEAMRYSVLAKGVKRAPPVMCISACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPSDLVPEPNLLRVIAEMARSVGSTGMAAGQFLDLEGGSNAVEFIQEKKFGEMGECSAVCGGLLAGAEDHEIERLRRYGRAVGLLYAVVDDILEDRLKSEGGVDRKNKGKSYAEVNGVEKAIEKAEELRETAKEELDGFEKYGERVFPLYSFVDYAFDRSFSVLDDASG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02147 343 Coils Coil 289 316 - -
Viun3g02147 343 ProSitePatterns Polyprenyl synthases signature 1. 127 143 IPR033749 -
Viun3g02147 343 SUPERFAMILY Terpenoid synthases 52 313 IPR008949 -
Viun3g02147 343 CDD Trans_IPPS_HT 74 333 IPR000092 GO:0008299
Viun3g02147 343 FunFam Geranylgeranyl diphosphate synthase 47 335 - -
Viun3g02147 343 Pfam Polyprenyl synthetase 76 268 IPR000092 GO:0008299
Viun3g02147 343 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 20 333 - -
Viun3g02147 343 Gene3D Farnesyl Diphosphate Synthase 47 343 IPR008949 -
Viun3g02147 343 SFLD Isoprenoid Synthase Type I 78 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02147 Viun-Chr3 17866645 17869096 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02147 K13789 - gmx:100788186 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02147 3 17866645 17869096 Viun3g02147 3 17866645 17869096 ECH