Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02050 ATGGTTTACGAAAGGATCCAAAAGCCTCAGGGTGGCGGGGGATTTTCACCGGGAAAATTGAGGAACATGCTACTGGGCGTGGAGAAGAAGAGGAAAGAAGAAGAAGAGCTCGATTCTACTTTCACCACGAGATCTCAGAATTCGGAAATGGATGAATCTGGTGGTAGCAGTTCTGATCATTGTAAAGATGTAGATGTTGTGAGTGTCCTTCCTGAGTATTCAACTTCTGCTTTAGTTCGCACCAGTAGCATAGAGGCAGTTGGTGGTGATGATCGTTTTGTGAAGGCTAATGCAGCAGTGAGTTCAAGGAATAGAATCTTAGAAGACCCTTCTTCAGATTATGATAGTGGGCATGAAAATATGAGCATCTCATCGTCAGTGTTTGAATTTCAAAAGGCCGAGCGGTCTACACAGAGAGTGCCAGTGAGACCATTCTCAAAACCAGCACCATCTAAATGGGATGATGCTCAGAAGTGGATAGCTAGTCCAACATCAAACCGGCCGAAGACAGTGCAGGCTCAAGGACAAGGTGGGCATGTAGGTCCACGTAAGGTCGGTAGTCTTGGTTATGGAAGCCGGCAACCTTCAATGAAGGTTGTTGTTGAAGTTCCAGATCAAAGAGAAATTGCTTTAGATGAACCGGATACCAAGCAAATTGATACAAATCAAACTAAGATGGAAAGTGGAGGACAGAAATTTGTGAGTTGGGAGGCTGATCCCTATGCAATTGCAAGTTCTTGTGTAAGCCTTAGCCAGCACAATTCGTCTCTTGCCATCCAGAATGCAACAACATTTGTTCCTCCCCCTTCAACAGCTCGGTCTGTATCGATGAGAGATATGGGAACCGAAATGACCCCTATTGCTAGCCAGGAGCCTTCAAGAACAGGTACCCCTGTGAGGGCAACAACACCAATGCGCAGTCCTAACTCTTCTCGGCCTTCTACTCCCCCAAGATCCTCCCCTGTATCCACTTTAACTGATCTTCATAGTGACAATCTGAATCTCAGCAAGAATGAATTGTCCGAAAAGGAGCTACAAATGAAGACCAGGCGTGAAATAATGGTCCTTGGGACACAACTTGGTAAAATGAATATTGCTGCTTGGGCTAGCAAAGAAGAGGAAGATAAGGATGCATCTACTTCCCTCAAAACTAAAGCAGAACAGCCTAAGAGTGTTGTTGAAGCACGTGCAGCAGCATGGGAGGAAGCTGAGAAGGCCAAGTATATGGCCAGGTTTAGGCGTGAGGAGATGAAAATTCAAGCATGGGAAAATCATCAGAAAGCAAAAACAGAAGCCAAGATGAAAAAAATTGAGGTAGAAGTTGAGAGAATACGTAGTAAGGCACATGATAAGCTAATGAATAAATTAGCTGCTGCAAGGCATAAAGCTGAGGAAAAACGAGCAGCAGCAGAAGCCAATAGAAATCATCAAGCTGCAAAAACTGAAGAGCAAGCAGATTATATACGAAGAACTGGTCATGTCCCTTCCTCGTATTTGTCATTTTCTTGCTGCAATTGGTGCTCTTGA 1527 0.4447 MVYERIQKPQGGGGFSPGKLRNMLLGVEKKRKEEEELDSTFTTRSQNSEMDESGGSSSDHCKDVDVVSVLPEYSTSALVRTSSIEAVGGDDRFVKANAAVSSRNRILEDPSSDYDSGHENMSISSSVFEFQKAERSTQRVPVRPFSKPAPSKWDDAQKWIASPTSNRPKTVQAQGQGGHVGPRKVGSLGYGSRQPSMKVVVEVPDQREIALDEPDTKQIDTNQTKMESGGQKFVSWEADPYAIASSCVSLSQHNSSLAIQNATTFVPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVRATTPMRSPNSSRPSTPPRSSPVSTLTDLHSDNLNLSKNELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKTKAEQPKSVVEARAAAWEEAEKAKYMARFRREEMKIQAWENHQKAKTEAKMKKIEVEVERIRSKAHDKLMNKLAAARHKAEEKRAAAEANRNHQAAKTEEQADYIRRTGHVPSSYLSFSCCNWCS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02050 508 MobiDBLite consensus disorder prediction 465 486 - -
Viun3g02050 508 MobiDBLite consensus disorder prediction 133 156 - -
Viun3g02050 508 Coils Coil 427 447 - -
Viun3g02050 508 PANTHER OS02G0116800 PROTEIN 103 504 - -
Viun3g02050 508 MobiDBLite consensus disorder prediction 24 40 - -
Viun3g02050 508 MobiDBLite consensus disorder prediction 286 309 - -
Viun3g02050 508 Pfam Remorin, C-terminal region 393 496 IPR005516 -
Viun3g02050 508 MobiDBLite consensus disorder prediction 1 62 - -
Viun3g02050 508 MobiDBLite consensus disorder prediction 283 329 - -
Viun3g02050 508 Coils Coil 449 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02050 Viun-Chr3 16529919 16538626 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02050 - - gmx:100787310 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02050 3 16529919 16538626 Viun3g02050 3 16529919 16538626 ECH