Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01696 ATGATCCATAGAATAGGAAGCAGAAACATGGAGGAGGTGGAGAAGGTGAAAGCAGAGGCATTGCAGATAATCGGAGTTTTTCAACTGCTTCCCAAGCTCGTCGTCTTCGATCTCGATTACACTCTTTGGCCTTTCTACTGTGAGTGCCGTTCGAAGCACGACACGCCGTATTTGTTTCCTCATTCTAGAGGCATTTTGCATGCGCTCAAAAGCCAGAACATTCATGCTGCAATTGCTTCCAAGTCACCAACTCCTGACATTGCAACCACGTATCTTGACAAGCTCGGCATCAGGTCAATGTTTGTCGCCGAGGAAATATTTTACAGCTGGACACACAAAACAGATCATTTTCAGAAAATTCATTCAAAGACCGGGGTCCCCTATAACTCCATGCTATTCTTTGACGATGATAATAGTAACATCCAAGAGATCTCAAAAATTGGAGTAACAAGTATTTTGGTGAGAAATGGGGTAAATCTTGAAGCATTTAGAAACGGCCTCGCAAAATTTTCTCAAAACGGGAATGCATCAAAGAAGAACAAGCAGAAAAGGCCCAAGTAA 561 0.4278 MIHRIGSRNMEEVEKVKAEALQIIGVFQLLPKLVVFDLDYTLWPFYCECRSKHDTPYLFPHSRGILHALKSQNIHAAIASKSPTPDIATTYLDKLGIRSMFVAEEIFYSWTHKTDHFQKIHSKTGVPYNSMLFFDDDNSNIQEISKIGVTSILVRNGVNLEAFRNGLAKFSQNGNASKKNKQKRPK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01696 186 Pfam Acid Phosphatase 30 50 IPR010036 GO:0016791
Viun3g01696 186 Pfam Acid Phosphatase 58 172 IPR010036 GO:0016791
Viun3g01696 186 NCBIfam HAD-IIIC family phosphatase 32 147 IPR010033 -
Viun3g01696 186 Gene3D - 10 176 IPR023214 -
Viun3g01696 186 CDD HAD_MDP-1_like 31 154 IPR035679 -
Viun3g01696 186 SFLD C1.5.2: MDP Like 14 178 - -
Viun3g01696 186 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 10 180 IPR010036 GO:0016791
Viun3g01696 186 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 14 178 - -
Viun3g01696 186 FunFam Magnesium-dependent phosphatase 1 16 176 - -
Viun3g01696 186 SUPERFAMILY HAD-like 31 162 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01696 Viun-Chr3 11881467 11883379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01696 K17619 - gmx:100795199 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01696 3 11881467 11883379 Viun3g01696 3 11881467 11883379 ECH
Viun3g01696 3 11881467 11883379 Viun6g03009 6 32913345 32914547 PCT