Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01066 ATGTCAGAGAATTTGATACAATTTGTGAGATGGCTTGTGATTTCAACAACACTGATGCAGAGTAATGTGATTTGTGGAAGCGAAAGCCATTTCAGAGCCATTTTCAACTTCGGAGACTCCAATTCTGACACCGGCGGTCTCTCGGCGGCGTTCGGACAAGCTCCTCCTCCCAACGGAATCACCTTTTTCCACTCTCCAAAAGGACGATTCTCCGATGGCCGCCTCATAATCGATTTTATAGCGAAGAGCTTGGGATTGCCATATCTCAGTGCTTACATGGACTCGGTTGGGTCCAATTTCAGCCACGGAGCGAATTTCGCCACCGCGGGATCCACCGTCAGACCTCAGAACACAACTAAGTCTCAGAGCGGATACAGTCCCATTTCCCTAGATGTGCAGTTCGTGCAATTCTCCGATTTCAAAACCAGATCCAAATTGGTTCGCCAACAAGGAGGGGTGTTTAAGGAGTTATTGCCCAAGGAGGAGTATTTTTCTGAGGCTCTATATACCTTTGATATTGGCCAAAATGATATCACAGCTGGCTATAAACTCAACTTGACCACAGAACAAGTCAAGGCCTATATTCCTGATGTATTGGACCAGTTCTCCACAGTTATAAAGGGTGTGTATGGGGAAGGTGGGAGGTCGTTCTGGATACACAACACAGGCCCATTGGGATGCTTGCCATACATGCTGGATCGCTATCCCATGAGCCCAGCCCAAATGGACGAGTTTGGGTGTGCCAAACCATTCAATGAGGTGGCAGAATATTTTAATAAAAGACTAAAAGAAACTGTTGAGAAACTGAGGGAAGAATTGCCAGAGGCTAAAATCACCTATGTTGATGTGTATAGGGTGAAGTACACCCTCATCAGCAATGCTGAAAAATATGGTTTTGAGAAGGGGGTGATTGCATGCTGTGGACATGGTGGGAAATACAACTTCAACAATAGAGAGAGATGTGGAGCAAGCAAAAGAGTGAATGGGACAGAGGTTGTGATAGCCAAATCTTGCGAAGATCCAAGTGTAAGGATCATTTGGGATGGAATCCATTACACTGAAGCTGCTAATAATTGGATCTTTCTGCAGATACTCAATGGCTCATTTTCAGATCCACCCACATCATTAGGAGCTACAAATTCACGTTCTTGGAAGACTGAACTGTGA 1167 0.4516 MSENLIQFVRWLVISTTLMQSNVICGSESHFRAIFNFGDSNSDTGGLSAAFGQAPPPNGITFFHSPKGRFSDGRLIIDFIAKSLGLPYLSAYMDSVGSNFSHGANFATAGSTVRPQNTTKSQSGYSPISLDVQFVQFSDFKTRSKLVRQQGGVFKELLPKEEYFSEALYTFDIGQNDITAGYKLNLTTEQVKAYIPDVLDQFSTVIKGVYGEGGRSFWIHNTGPLGCLPYMLDRYPMSPAQMDEFGCAKPFNEVAEYFNKRLKETVEKLREELPEAKITYVDVYRVKYTLISNAEKYGFEKGVIACCGHGGKYNFNNRERCGASKRVNGTEVVIAKSCEDPSVRIIWDGIHYTEAANNWIFLQILNGSFSDPPTSLGATNSRSWKTEL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01066 388 SUPERFAMILY SGNH hydrolase 164 364 - -
Viun3g01066 388 CDD SGNH_plant_lipase_like 33 368 IPR035669 -
Viun3g01066 388 FunFam GDSL esterase/lipase At1g09390 22 369 - -
Viun3g01066 388 Gene3D SGNH hydrolase 21 368 IPR036514 -
Viun3g01066 388 Coils Coil 252 279 - -
Viun3g01066 388 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 22 373 - -
Viun3g01066 388 Pfam GDSL-like Lipase/Acylhydrolase 34 361 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01066 Viun-Chr3 6675152 6677979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01066 20 376 Acyl Lipid Metabolism Gene Families AT4G10950 30.108 8.26e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01066 - - var:108335696 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01066 3 6675152 6677979 Viun3g01066 3 6675152 6677979 ECH