Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00954 ATGAAGAAAGGGACTAAGAGGAAGGCGAAACAGCAGCAAGAAGCCAAACAAGACGCAGCCGAAGACAACACCACCAAACCACAACCTCGAGCTAAACGAGCCAGGTCCTCCAAGCCTCAATCCGAGCCTGAGTACTTCGAAGATAAGCGCAACTTGGAAGATTTGTGGAAGGAAACATTCCCCGTTGGAACTGAGTGGGACCAATTGGATACCGTGTATCAATTCAAGTGGGATTTCTCAAATCTAGAAAATGCGTTTGAAGAGGGTGGCGTGTTGTATGAGAAGAAGGTTTACCTCTTTGGTTGTACTGAGCCTCAACTCGTCATGTTCAAAGGGGAAAGCAAAGTTGTCTGCGTACCTGCTGTAGTAGCTGTTGTATCACCTTTCCCACCATCTGATAAAATTGGAATAAACTCAGTCCAAAGAGAGGCTGAAGAGATAATTCCCATGAAGCAGATGAAAATGGACTGGGTTCCATATATTCCCTTGGAGGATCGAGATAGCCAAGTGGACAGGCTAAAATCCCAAATATTTATCTTGAGCTGCAACCAGAGAAGGTCTGCTTTAAAACACCTGAAGTTGGATAGATTAAAAAAATATGAATACTGCTTGCCTTATTTCTATCAGCCATTTAAGGAAGATGAGGTTGAACAGAGCACTGAAGTTCCTATAATATTTCCTGCTGAGCCAAAGCCGGTCTTCTGTGAATTTGATTGGGAATTAGACGAACTTGAGGAGTTTACCGATAAACTTGTTGAGGAGGAAGAGTTAACAGAAGATCAAAAGGATGCATTCAAGGAGTTTGTCAAGGAAAAGGTTCGTGAAGCAAAGAAGGCTAATAGAGAGGCAAGGGAGGCTCGGAAAAAGGCCATTGAAGAAATGAGTGAGGAAACTAAAGCTGCATTTGAGTCTATGAGATTTTACAAGTTCTACCCTGTTCAATCTCCAGATGCACCAGATGTATCAAATGTTAAGTCTCCATTCATTAACAGGTATTATGGAAAGGCTCATGAGGTTCTGTGA 1023 0.4262 MKKGTKRKAKQQQEAKQDAAEDNTTKPQPRAKRARSSKPQSEPEYFEDKRNLEDLWKETFPVGTEWDQLDTVYQFKWDFSNLENAFEEGGVLYEKKVYLFGCTEPQLVMFKGESKVVCVPAVVAVVSPFPPSDKIGINSVQREAEEIIPMKQMKMDWVPYIPLEDRDSQVDRLKSQIFILSCNQRRSALKHLKLDRLKKYEYCLPYFYQPFKEDEVEQSTEVPIIFPAEPKPVFCEFDWELDELEEFTDKLVEEEELTEDQKDAFKEFVKEKVREAKKANREAREARKKAIEEMSEETKAAFESMRFYKFYPVQSPDAPDVSNVKSPFINRYYGKAHEVL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00954 340 MobiDBLite consensus disorder prediction 1 47 - -
Viun3g00954 340 Coils Coil 244 264 - -
Viun3g00954 340 MobiDBLite consensus disorder prediction 8 47 - -
Viun3g00954 340 Coils Coil 266 300 - -
Viun3g00954 340 Gene3D - 1 78 - -
Viun3g00954 340 Coils Coil 2 22 - -
Viun3g00954 340 PANTHER PROTEIN HEAT INTOLERANT 4-RELATED 33 339 IPR039313 GO:1900034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00954 Viun-Chr3 5851970 5858366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00954 - - ccaj:109799386 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00954 3 5851970 5858366 Viun3g00954 3 5851970 5858366 ECH
Viun3g00954 3 5851970 5858366 Viun9g01886 9 28699888 28707914 PCT