Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00856 ATGCTGAGTTACATCAACAACATCATTCGCTATTCTTTTCAGTTCTTCTACCTAATGCGGGAGGAGCACCCCTTGTTGGCAGAGAAACCTGTGTTAGTCCAACCATGCTTGGATCAAAGCCATGGCCAGGAAAAAACCGACAGCGATGTTGTGTTATCCAAAACAACCACATCGGACAAATCTCATGACTTTTGCAACCACTCTGAGTCCTTCAAGAAGCTCGTGGAGATGGGTCTGCCGTGTAATGAATCAGTGGTGGAAAAACTGCGTTGGTTGCGGTCCCAAATCATTGGTTACCATGCAGAGTTTGATTCCCCATTTGGAAAAAGAAAAGTTCTCTATGCTGACCACACTGCTTCTGGCCGCAGCCTTCACTATAACGAGAATTTCATTATCAATCACGTTCTTCCTTTCTATGGTAACACGCACACATGCGACAGCTACGTTGGAAGCAGGACAACAAAAATGGTACACGAAGCAAGTGAGTACATTAAGAAATGTTTAGGTGGTGGGGAAGATGATGCACTTATATTATGTGGCTCGGGAACAACTGCAGCTATCAAGAGGCTGCAAGAAGTGATGGGGATCACTGTGCCATCTGTTATGAGGGAAAGGGTTTTGAAGAGTGTGAACACAGAAGAAAGATGGGTGGTTTTTGTGGGACCGCATGAGCACCATTCAAACCTTCTTTCTTGGAGGCAAAGTTTGGCTGAGGTGGTAGAGATTGATCTTGACGACCAAGGATTGCTTGACATGGATGCTCTAAGGATACAAATTGAGGCCTACAAAGATACCAACAGGCCCATGTTGGGATCTTTTTCAGCTTGTAGCAATGTCACGGGAATCTACCTAGATACACGTGCAGTTGCTCAGCTTCTTCATCAGTACAAAGCCTTTGCATGCTTTGATTTTGCAGCAAGTGGTCCATACGTGGAGATTGACATGAGATCTGGGGAAAGTGATGGGTATGATGCAGTGTTCTTGAGTCCACACAAGTTTCTTGGTGGTCCTGACTCTCCTGGGGTTCTCCTCATGAACAAGGCCCTTTATCTTCTAGGATCTTCTCCACCGTCAACTTGTGGAGGTGGAACCGTGACTTATGTCAATGGCTTCAACGAACAGGAAACATTATACCTGGAGAGCATAGAGGAAAGGGAAAGTGGGGGCACGCCTCCAATAATCCAGACAGTGAGAGCAGCATTGGCATTTTGGGTGAAAGAATACATAAGCTGTGAAGAGATTGAAAAAAGTGAGCAAATGTACATCAACAAGGCACTAAAGAGGCTTGGTTCAAACCCCAACATTGAGGTCCTAGGAAACTTGAAGGCCAAGAGACAAGCTATATTGTCGTTTCTGATCTACTCCACCACCTATTGTTCCTCAGCAGGTGAATGGAGTGATGGTAACCAGAAAAATGAAGGTGAACTTGATCTGTGGGCAGAAACAGGGAACCAAAGAGGGAAACCACTTCATGGCCCTTTTGTTGCAACATTGCTCAATGACCTCTTCGGAATCCAAGCTCGTGGAGGGTGTGCTTGTGCTGGACCTTATGGCCACCAATTGCTCCACATCAACAGGTCTCAGTCACTTGCCATTAGATCAGCAGTTGAAAAGGGTTACATTGGAGTAAAACCAGGGTGGACAAGAGTTAGTTTTCCTTACTACATGAGTGAAGAGGATTTTGAGTACATTCTGAATGCCATAGAATTTTTAGCTGTGTATGGCCAACGCTTCTTTCCCCTTTATAGCTTTAATTTGATAAATGGGAGCTGGAGATTGAAGACAGAGAAAGTTGAGGCACTAACCAGTGAAGGAAACTGCAACTTTGGTGTTCATAGTATTTGGTGGAACGAATCAAACTTTGAGGTGGCTAAATGCATTGCTACTCGCCTTCCAAATTTCCCTTCTCAGGGAATAATCAAGGAGGAACTCGATCCAAATATCTTCTGCTTCAGAGTGTAA 1962 0.447 MLSYINNIIRYSFQFFYLMREEHPLLAEKPVLVQPCLDQSHGQEKTDSDVVLSKTTTSDKSHDFCNHSESFKKLVEMGLPCNESVVEKLRWLRSQIIGYHAEFDSPFGKRKVLYADHTASGRSLHYNENFIINHVLPFYGNTHTCDSYVGSRTTKMVHEASEYIKKCLGGGEDDALILCGSGTTAAIKRLQEVMGITVPSVMRERVLKSVNTEERWVVFVGPHEHHSNLLSWRQSLAEVVEIDLDDQGLLDMDALRIQIEAYKDTNRPMLGSFSACSNVTGIYLDTRAVAQLLHQYKAFACFDFAASGPYVEIDMRSGESDGYDAVFLSPHKFLGGPDSPGVLLMNKALYLLGSSPPSTCGGGTVTYVNGFNEQETLYLESIEERESGGTPPIIQTVRAALAFWVKEYISCEEIEKSEQMYINKALKRLGSNPNIEVLGNLKAKRQAILSFLIYSTTYCSSAGEWSDGNQKNEGELDLWAETGNQRGKPLHGPFVATLLNDLFGIQARGGCACAGPYGHQLLHINRSQSLAIRSAVEKGYIGVKPGWTRVSFPYYMSEEDFEYILNAIEFLAVYGQRFFPLYSFNLINGSWRLKTEKVEALTSEGNCNFGVHSIWWNESNFEVAKCIATRLPNFPSQGIIKEELDPNIFCFRV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00856 653 Gene3D - 131 358 IPR015421 GO:0003824
Viun3g00856 653 SUPERFAMILY PLP-dependent transferases 104 569 IPR015424 -
Viun3g00856 653 PANTHER CYSTEINE DESULFURASE 83 577 - -
Viun3g00856 653 Gene3D Aspartate Aminotransferase, domain 1 387 574 IPR015422 GO:0003824
Viun3g00856 653 Pfam Aminotransferase class-V 138 453 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00856 Viun-Chr3 5251490 5254523 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00856 - - gmx:100778947 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00856 3 5251490 5254523 Viun3g00856 3 5251490 5254523 ECH