Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00855 ATGGTGAGGTTTTTAGGTTTGACTCTTGGTTACACTGAAGAACCCCGGGAAATAGCATCAAGATCGAATCTGACTGGTGAGTCTGGTGAAAATGGGTGGCTCATCAGGTTCTTTGACTCGGCGTTCTTCTGCGAGTGGATTGCTGTTAGCTACTTGTATAAGCATGATCACGCGGGGGTGCGTGATTATCTCTGCAATAGAATGTATACACTTCCGTTGCAAGGTGTTGAGAGTTATTTGTTCCAGATATGTTACATGATGATACACAAGCCTAGTCCATCCTTGGATAAATATGTGATAGATGTGTGCTCGAAGTCGCTTAAAATTGCTTTGAAGGTACATTGGTTCTTGTTGGCAGAGCTTGAGGACTCTGATGATAATGAAGGGATTAGTAGGATTCAGGAGAAGTGTCAGATTGCTGCCACCTTGATGGGTGAGTGGCCACCTCTAATTAGGCCTCAAACTGAACCTCCAAGTCCTGGAGGGAAGAGCCAAGTTTTGAATAGGTTACTGTCATCAAAAAATCGCTTGTTGTCACTAACATCCTCACCACCTGGTCAGAAGTCTTTATCATTTTCACCGTCCTCAGGAAACAATTTGCAAGAGGATGGGAAACCAATGTCTCCAGACGAGAACAAGATATTTAAGAAGTTTATGCCAGGCCCTAAGGTTAGAGATGCGTTACTTTTTAGGAAGTCAGTGGACAAAGACGATGATGGTTCTGAAAAGGATGGTTTTTTCAAGAGGCTTTTGAGAGATAGCAAAGGTGATGATGAACTGGGCCAAAAATTTCGTGATGCATTTCTGTTTAGGAAGTCATCTGCGAAAGATGATGAAGAGTCTGAAAAAGATAATTTCTTTAAAAGGTTCTTAAGGGACAGTAGAGGTGACGATGAAGACTCAGAAAAGGATGGTTTCTTCCGAAGACTCTTAAGGGACAGTAGAAGTGAAGATGAAGATGTAGCTTCAAGTTCGGAGGGACTATTCAAGAGGTTGTTTCGTGATAGCAAGAATGATTCTGAGGACAGAGCATACTCTAAAACAATAGAATATGAAGATAAAGAGGGATTTTTTCGAAAGTTGTTCCGAGAGAAATCGGAAGATAGGAAGGACGGGAGTGATAGGAATGATAACAGAGAAGCTACTAATGTTGACGAGAAATGTGCCAAACCTGCTGAAGAGGATGAAAAAGAAGGGTTTTTCCGGAAATTATTAAAGGATAAATTTGAGGACAAGAAGGATACAAATGATAAGATTGAAGAAGGTACTCCCAACGGTGAGGAAGAAGAGTCTTCTGAGTTTTCCTTGTTCAAAAGATTATTTCGTGTGCACCCAGAAGATGCTAAAAGTAGTATGGCCAATGCAAACATCAATAACGGTGGTTTAGTTGAAAGTAGTCCAGGTACTGATAATTTTTTTCGTAAATTGTTCAGAGATCGTGACCGTTCAATTGAAGATTCAGAGCTATTGGGTCCAAAAAGACAGAAAGAGAAGAAACCTGGATCCCCAACGCAGCAAAGTGAAAAATCAAGCACAAAGCCACCATTACCAATTAGTCCATCTCAGTTTCGGAAAGGGGCATACCATGATTCATTGGAGTTTGTGCAGTCATTATGTGATACGTCGTATGGGTTAGTGGATGTATTTCCACTTGAAGATCGCAAAAGTGCTCTTCGTGAGGCGCTTGTGGAAATCAATCTACATGTAGTGAAGGTTCAGAACACTGGAGGTGTTTGTTTTCCATTGGGAAAGGGCATGTATCGTGTGCTTAACATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAAGCACCTTTCCTGATCTGTGTAGAGGTTTTGAGATGTGAAATGCCAAGTAATTCTAAGGAGGCATCAAGTTCTCAAAAACTTTCTCAAGGGGGAATTCCTTTGGCAAATGGAGATGCGCTCATGCAAAGACCACCCCCCTGGGCTTATCCGTTACGGACAGCACAAGAGGTTTATCGCAATAGCAATGATAGGATGTCCAGTTCAACTGCTCACGCAATTGACCAGGCAATGACTCATATATCTGAGGCAAAAATCAAATTTGTTAGTGTGAATCTTTCCACAGAAACACAGTTAAATGGTCAGCCAGAGCAAATTGAAGTGGTTGATCTACATGGTGGCAGTCAGCGTTCTGCTTCAATTCATAGAGATGGTGTGTCTGACAAAGCTGCAGCAGGACGTGGCAGTGATTTGGAATGGGTACGTGTAGTGTTGACAGCTGATCCTGGGGTTAGATTGGAAGATATTGAGGACCAAGCACCTCCCCGGAGGAAGGAACATCGCCGTGTTCCAAGTACGGTGGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAAGGGGAAGCACCTCTTGGACTTCCTTTGAAAGGTGCCGGTCAAGATTCATCTGATGCACAACCAAGGGCTAATGGAATTACTCCCAAAGCCAGCGATGCCTTGTCCGGTGAACTTTGGGAGGCAAAGAAGGATAGGATATGCAAGGCTTCCATATATGGGAAGTTACCTGGTTGGGACTTGCGATCTATTTTAGGATTGAAGGCTTATGACGACTACTAA 2586 0.4285 MVRFLGLTLGYTEEPREIASRSNLTGESGENGWLIRFFDSAFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGVESYLFQICYMMIHKPSPSLDKYVIDVCSKSLKIALKVHWFLLAELEDSDDNEGISRIQEKCQIAATLMGEWPPLIRPQTEPPSPGGKSQVLNRLLSSKNRLLSLTSSPPGQKSLSFSPSSGNNLQEDGKPMSPDENKIFKKFMPGPKVRDALLFRKSVDKDDDGSEKDGFFKRLLRDSKGDDELGQKFRDAFLFRKSSAKDDEESEKDNFFKRFLRDSRGDDEDSEKDGFFRRLLRDSRSEDEDVASSSEGLFKRLFRDSKNDSEDRAYSKTIEYEDKEGFFRKLFREKSEDRKDGSDRNDNREATNVDEKCAKPAEEDEKEGFFRKLLKDKFEDKKDTNDKIEEGTPNGEEEESSEFSLFKRLFRVHPEDAKSSMANANINNGGLVESSPGTDNFFRKLFRDRDRSIEDSELLGPKRQKEKKPGSPTQQSEKSSTKPPLPISPSQFRKGAYHDSLEFVQSLCDTSYGLVDVFPLEDRKSALREALVEINLHVVKVQNTGGVCFPLGKGMYRVLNIPEDEAVLLNSREKAPFLICVEVLRCEMPSNSKEASSSQKLSQGGIPLANGDALMQRPPPWAYPLRTAQEVYRNSNDRMSSSTAHAIDQAMTHISEAKIKFVSVNLSTETQLNGQPEQIEVVDLHGGSQRSASIHRDGVSDKAAAGRGSDLEWVRVVLTADPGVRLEDIEDQAPPRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRANGITPKASDALSGELWEAKKDRICKASIYGKLPGWDLRSILGLKAYDDY 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00855 861 MobiDBLite consensus disorder prediction 504 518 - -
Viun3g00855 861 MobiDBLite consensus disorder prediction 484 503 - -
Viun3g00855 861 MobiDBLite consensus disorder prediction 178 213 - -
Viun3g00855 861 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Viun3g00855 861 MobiDBLite consensus disorder prediction 484 522 - -
Viun3g00855 861 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Viun3g00855 861 MobiDBLite consensus disorder prediction 178 205 - -
Viun3g00855 861 MobiDBLite consensus disorder prediction 366 396 - -
Viun3g00855 861 PANTHER PHOSPHATIDYLINOSITOL KINASE 44 849 IPR015433 GO:0046854|GO:0048015
Viun3g00855 861 MobiDBLite consensus disorder prediction 412 433 - -
Viun3g00855 861 MobiDBLite consensus disorder prediction 794 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00855 Viun-Chr3 5238235 5246572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00855 1 851 Lipid Metabolism Gene Families AT5G64070 64.091 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00855 K19801 - gmx:100778394 1523.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00855 3 5238235 5246572 Viun3g00855 3 5238235 5246572 ECH