Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00850 ATGCAATTTGAAGAGATCAAGGCTGCTGTCTCTGCACTTTGGAACACTCGTGGCTTGAACTGGCCTAATCCATCTGGGCCACAGAGGCAGAAAACTGAAGATTTAGACTTGCTTGATTGGCTTAAAGCTATATTTGGTTTTCAAAGGGATAATGTCAGGAATCAGAGGGAGCATCTGATTTTGCTTCTTGCTAACTCTCATATAAGGCTACATCCTCAACCCGAGCCTTTCAACCTGCTGGATGATCGTGCTATAGATTCAGTGATGAAAAACCTTTTTAAGAATTACAAGATGTGGTGCAAATTCCTAGGACGAAAACACAGCTTACGACTTCCTCAAGGTCAGCAAGAGACACAGCAGCGAAAGTTGCTTTATATGGGGTTGTATCTTCTTATCTGGGGTGAAGCATCCAACGTTCGCTTCATGCCTGAGTGTCTGTGCTACATATTCCACAACATGGCATATGAACTCCACGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAGAATATCAAGCCTTCCTATGGTAGTGATGACGAGGCATTCCTGTGCAAGATTATAACTCCTTTGTACCGAGTAATTGAAAGGGAAGCCAAGAAGAGTCGACATGGAAAGGCTCCACACTCAGCATGGTGCAACTACGATGATCTAAATGAGTATTTCTGGACATCTGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGATGGTGAATTCTTCAAATCAACTAGTGATTTGTCACAGGGAAGAAAGGGTGCTCCAAGAAATTTTGAAAAAACTGTCAAATCAAATTTTGTTGAGACACGATCATTCTGGCACCTCTTCCGCAGCTTTGATCGTCTGTGGACATTTTTTATACTGGGTTTGCAGGTGATGCTCATTATTGCTTGGGAAGGGATTACACTAACCAATATATTTCAGAGGGAAGTTTTATATTATCTCTCAAGCATATTCATCACAGCATCCATTCTGCGCTTGCTTCAAAGTATCTTGGACCTGATCCTGAACTTTCCAGGCTATCATCGATGGAAATTTGTTGATGTGCTAAGAAATATTCTTAAAGTCATCGTCACTCTTTTTTGGGTTATCATTCTCCCACTCTTCTACGTTAATTCCTTCAAGGAGGCACCTGGGGGCCTGAAGCAGTTTCTTCCCTTTTTCACTCAAATAAAAGGCATTCCACCACTTTACATAATGGCTGTTATATTATATTTGCTTCCAAATTTACTTGCAGCTATTCTGTTTCTTTTCCCAATGTTAAGGCGTTGGATTGAAAACTCAGACTGGCACATAGTTAGATTTGTCTTGTGGTGGTCTCAGCCAAGCATCTATGTTGGAAGAGGAATGCATGAAAGTCAATTTACTCTTCTGAAGTACACTATATTCTGGTTGTTGCTTTTGACTTGCAAATTTTTATTCAGTTTTTTTGTCCAGATTAAACCTCTAGTTAGACCAACAAGGGACATAATGAGCATTCGGCGTGTCGATTTTGAATGGCATGAATTTTTTCCCACCGCTCGAAATAACTATGGTGCAGTAATCGCACTCTGGGCTCCTGTAATTTTGGTTTATTTCATGGACACTCAAATCTGGTATGCAATCTTCTCAACTTTGTACGGAGGTGCTGTTGGAGCCTTTGATCGTCTAGGAGAGATACACACCTTGGTCATGCTAAGGTCCCGGTTTCTTTCAATGCCTGGTGCATTCAACACATGCTTGGTTCCTTCTGATATTAAGCGAAAAGAGAGATTCTCTTTCTCAAAGAAATTCGCTGAGATTTCTGCAAACAAAAGGACCGAAGCTGCCAAATTTGCCCAAATATGGAATGAGATTATTTGTTGTTTCCGTGAGGAAGATCTCATAAGTGATAGGGAGATGGATCTTTTGCTAGTTCCCTACTCATTGGGTCATTGTCTGAAAATAATTCAGTGGCCGCCATTTTTGCTTACAGGGAAGATTGCTGTGGCACTGGATATTGCAACTCAGTTTCGAGGGAGGGACTCTGACCTTTGGAAGCGCATATGTGCAGATGAATATATGAAATGTTCTGTGATTGAATGCTACGAATCCTTTAAACATTTTTTACAGGATTTGGTGATAGGGGAAACTGAAAAAAGAATAATTTCCATCATCATTAAAGAAGTCGAGAGCAACATCTCAAAGAATACTCTTCTTACAAATTTCCGTATGGTCTATTTACCTTCCCTTTGTAAGAAGTACGTGGAACTTGTGGAATTTTTGAAAAATGGAGATCCATCCCAGCAGGGTACTGTGGTGGTCTTGCTGCAAGACATGTTAGAAGTGGTTACCGACATGATGGTGAATGAAATCAGCGAATTGGCAGAACTTAATCAAATTAGCAAGGACACTGGACAACAAATTTTTGCTGGTACAGAGGGAAACCCCGCTATACGTTTCCCGCCTGTTGTTACAGCGCAATGGGAGGAACAGATAAGACGTCTTTATCTACTCTTGACTGTGAAAGAATCTGCTGTTGATGTTCCAATAAACACCGAAGTACGAAGAAGGGTTGCATTCTTTAGCAATTCATTGTTCATGGATATGCCACGTGCTCCTCGAGTACGTAAAATGCTCTCATTCAGTGTCCTAACTCCATACTACAGTGAAGAGACTGTATATTCTAAGAATGACATTGAGTTTGAGAATGAAGATGGCGTGTCAATCATATATTACCTTCAGAAGATATTCCCTGACGAATGGAATAACTTCTTGGAGCGACTTGATTGTAAGAAAGATAGCGAGGTATGGGAGAAAGATGAGAATATATTACAGCTACGTCACTGGGCCTCATTAAGAGGACAAACTCTTTGTAGGACAGTTAGGGGAATGATGTACTACAGGCGGGCAATAAAGCTCCAGGCATTTCTTGATATGGCTTCTGAAAAAGAGATACTCGACGGCTATAAAGCTATTGATGTTCCATCTGCGGAAGGAAAAGAGAGTCATAGATCCTTATATGACAATTTAGAGGCTATGGCTGACATGAAATTCACATACATTGCTACATGTCAGAACTATGGGAATCAGAAGCGTAGTGGAGATCGCCGTGCAACTGATATCCTGAATCTGATGGTTAACAATCCCTCACTGCGTGTTGCATATATTGATGAACATGAAGAAAGAGAAGATGGACAAGTGCATAAAGTTTATTATTCTGTATTGGTCAAAGCTGTGGACAATCTTGACCAAGAAATATATCGAATAAAGCTTCCAGGAGCGGCAAAGTTAGGAGAAGGAAAGCCAGAAAACCAAAACCATGCTATCATTTTTACTAGAGGGGAAGCTCTTCAGACTATCGACATGAACCAGGATAATTACTTAGAAGAAGCTCTGAAAATGCGTAACCTTTTGGAAGAATTTAACGAGGATCATGGATTGCGCGCACCCACCATATTAGGTGTTCGTGAGCATATTTTCACTGGAAGTGTCTCTTCCTTGGCCTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGCCAAAGAGTTCTTGCTAGAACGCTAAAGATTCGTTTCCACTATGGGCATCCGGATGTTTTTGATAGAATTTTCCATTTTACTCGTGGAGGATTCAGCAAGGCTTCTTGTGGCATCAACCTAAGCGAGGATATATTTGCTGGTAACATTGATGATTCATTGTTTTTTGGCAGTGATTTGATATTTCTACCTCTGCATCAAGCCTTTTCCTATACAGGATTCAACTCAACACTAAGACGTGGAAATGTTACTCATCATGAATACATCCAAGTTGGAAAGGGTAGAGATGTAGGGCTCAATCAAATCTCTCTTTTTGAAGCAAAAGTGGCATGTGGTAATGGAGAGCAGACACTAAGCAGGGATATCTACCGACTGGGGCATCGATTTGACTTTTTCCGAATGCTATCATTTTATTTTACAACTATTGGATTTTATTTCAGCTCAATGATAGTGTCCCTCACGGTTTATGCTTTCCTGTATGGCAAATTTTACCTGTCAGTGAGTGGACTTGAGGCTGCTATAGTTAAGTTAGCCAGGAAGAAGGGAGATGATCCATTAAAGGCAGCAATGGCTTCCCAGTCCCTTGTTCAAATTGGTATTCTGATGACTCTTCCCATGGTCATGGAAATTGGACTTGAGAGAGGATTCAGAACTGCTCTAAGTGAGATCATAATAATGCAGCTGCAGCTAGCACCCGTTTTCTTCACTTTTTCACTAGGGACTAAGATGCACTACTTTGGGCGCACTCTCTTGCATGGTGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTTGTTCGTCATGAAAGGTTTGCGGAAAATTATAGGATGTATTCCAGGAGTCACTTTGTAAAAGGGATGGAGCTAGCTATGCTGCTTATATGTTATAAGCTTTATGGAGCAGCAGCTCCTGATTCAGTATCATATGGCCTTCTCTCATTATCGATGTGGTTTTTAGTGTGTTCGTGGTTGTTCAGTCCATTCCTTTTTAATCCATCAGGATTTGAGTGGCAGAAGATAGTTGAGGATTGGGATGATTGGACAAAATGGATAAATAGTCAGGGTGGTATTGGTGTTCCTGCAAACAAGAGCTGGGAATCGTGGTGGAATGAGGAACAGGAGCATCTGCTGCACACTGGGCTCTGGGGGAAAATTTGTGAGGTCATTCTTGCCCTGCGTTTCTTTATCTATCAGTATGGGATTGTATATCATCTTCATGTGGCAAGATCTGATAAGAGCATCACGGTTTATGGTCTGTCCTGGCTAGTGGTAGTAGTTGCCATAATCATCTTGAAGATAATATCCTTGGGTAGAAAGACGTTCAGTGCAGATTTCCAACTGATGTTTCGTCTCCTCAAATTGTTTCTGTTTATTGGAATTGTTGTCATTCTCGTCTTGATGTTTGCCCTACTGAATCTCACAGTTAGTGACATCTTTGTGAGCCTCCTAGCCTTTATGCCGACAGGTTGGGCATTTATACAGATAGGTCAAGCATGCAAGCCCTTGGTGAAGGCAATTAGAATGTGGGGGTCTATAAAAGCGTTATCAAAAGGATATGAATACGTCATGGGAGTGATTATCTTTGCACCAGTGGCCATATTGGCTTGGTTCCCATTTGTTTCAGAATTTCAAACTCGACTGCTATACAATCAAGCTTTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGGCTGGTGGTAAGAAGAATAAATAA 5220 0.4126 MQFEEIKAAVSALWNTRGLNWPNPSGPQRQKTEDLDLLDWLKAIFGFQRDNVRNQREHLILLLANSHIRLHPQPEPFNLLDDRAIDSVMKNLFKNYKMWCKFLGRKHSLRLPQGQQETQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGSDDEAFLCKIITPLYRVIEREAKKSRHGKAPHSAWCNYDDLNEYFWTSDCFSLGWPMRDDGEFFKSTSDLSQGRKGAPRNFEKTVKSNFVETRSFWHLFRSFDRLWTFFILGLQVMLIIAWEGITLTNIFQREVLYYLSSIFITASILRLLQSILDLILNFPGYHRWKFVDVLRNILKVIVTLFWVIILPLFYVNSFKEAPGGLKQFLPFFTQIKGIPPLYIMAVILYLLPNLLAAILFLFPMLRRWIENSDWHIVRFVLWWSQPSIYVGRGMHESQFTLLKYTIFWLLLLTCKFLFSFFVQIKPLVRPTRDIMSIRRVDFEWHEFFPTARNNYGAVIALWAPVILVYFMDTQIWYAIFSTLYGGAVGAFDRLGEIHTLVMLRSRFLSMPGAFNTCLVPSDIKRKERFSFSKKFAEISANKRTEAAKFAQIWNEIICCFREEDLISDREMDLLLVPYSLGHCLKIIQWPPFLLTGKIAVALDIATQFRGRDSDLWKRICADEYMKCSVIECYESFKHFLQDLVIGETEKRIISIIIKEVESNISKNTLLTNFRMVYLPSLCKKYVELVEFLKNGDPSQQGTVVVLLQDMLEVVTDMMVNEISELAELNQISKDTGQQIFAGTEGNPAIRFPPVVTAQWEEQIRRLYLLLTVKESAVDVPINTEVRRRVAFFSNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDIEFENEDGVSIIYYLQKIFPDEWNNFLERLDCKKDSEVWEKDENILQLRHWASLRGQTLCRTVRGMMYYRRAIKLQAFLDMASEKEILDGYKAIDVPSAEGKESHRSLYDNLEAMADMKFTYIATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEHEEREDGQVHKVYYSVLVKAVDNLDQEIYRIKLPGAAKLGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGLRAPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARTLKIRFHYGHPDVFDRIFHFTRGGFSKASCGINLSEDIFAGNIDDSLFFGSDLIFLPLHQAFSYTGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSFYFTTIGFYFSSMIVSLTVYAFLYGKFYLSVSGLEAAIVKLARKKGDDPLKAAMASQSLVQIGILMTLPMVMEIGLERGFRTALSEIIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHERFAENYRMYSRSHFVKGMELAMLLICYKLYGAAAPDSVSYGLLSLSMWFLVCSWLFSPFLFNPSGFEWQKIVEDWDDWTKWINSQGGIGVPANKSWESWWNEEQEHLLHTGLWGKICEVILALRFFIYQYGIVYHLHVARSDKSITVYGLSWLVVVVAIIILKIISLGRKTFSADFQLMFRLLKLFLFIGIVVILVLMFALLNLTVSDIFVSLLAFMPTGWAFIQIGQACKPLVKAIRMWGSIKALSKGYEYVMGVIIFAPVAILAWFPFVSEFQTRLLYNQAFSRGLQIQRILAGGKKNK 1739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00850 1739 SMART FKS1_dom1_2 120 236 IPR026899 -
Viun3g00850 1739 Pfam 1,3-beta-glucan synthase component 836 1217 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Viun3g00850 1739 Pfam 1,3-beta-glucan synthase component 1240 1556 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Viun3g00850 1739 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 8 1734 - -
Viun3g00850 1739 Coils Coil 1112 1132 - -
Viun3g00850 1739 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 122 233 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00850 Viun-Chr3 5203073 5217553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00850 1 1739 Glycosyltransferase AT1G05570 58.827 0.0 2118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00850 K11000 - gmx:100777985 3086.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01786 9 27383148 27397125 Viun3g00850 3 5203073 5217553 PCT