Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00756 ATGAATTCTCCAATTCATGCCCCTTCACCACCTTCCTCTTCTTCTTGCTCGTATAACGGTCCTCCTCCTTGCCTCAGTCATGGTTCTCGTAATTTCAAGTCTCCTCTGTTGTTGCCACAGACAATTCGTACCTCTCAAAAGATGTATCGCTGCTCTGGAGGCCATGTGGAGGCTTCTTCTAACACTAATCCTTTGAAAAATTATGTAGTGGGAAAAAGTACTTCAGGGTGGTTTGAAACACAGTCCTTGGTTTCTGAGCAGTTAGTCAAGAGGCGCTTGTTGCCACTTGAAGCTTTAGCAACTCCTACAGTTCAAGATTTTTCTGATACACCTCTTATTGGTGATGATAAGATTGGAGTGTTATTGTTGAACCTCGGAGGTCCAGAGACTCTGGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCTGACCCAGATATTATACGACTACCAAGGTTGTTTAGCTTTCTTCAGAAGCCCTTGGCCAAATTTGTATCTGTTTTAAGAGCACCAAAGAGCAAAGAAGGCTATGCTTCTATTGGGGGTGGATCTCCTCTTAGACGCATTACTGATGCACAGGCTGAAGAGTTGAGAAAATCTCTTTGGGCGAAGAATGTCCCAGCCAAAGTGTATGTTGGCATGCGTTATTGGCATCCATTCACTGAAGAGGCTATTGAACAGATTAAAAGGGATGGAATTACAAAGCTTGTTGTGCTTCCACTTTATCCACAATTTTCAATTTCAACTAGTGGTTCAAGTCTTCGTCTCTTAGAGAGTATATTCAGAGAGGATGAATATCTAGTTAAGATGCAGCATACCGTAATTCCTTCATGGTACCAGCGTGAAGGATACATTAATGCCATGGCAAATTTAATTGAAAAAGAGCTGAAAGGTTTTGACTGTCCTGAGAAGGTCATGATATTTTTTAGTGCACATGGGGTGCCTCTTGCCTATGTAGAAGAGGCTGGTGATCCATACAAAGCAGAGATGGAGGAATGTGTTGATTTAATCATGGAAGAGCTTGAAAAGAGAAAGATAACTAATGCATACACCCTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTATACAGATGAGACAATAGTTGAACTTGGGAAAAAGGGAGTAAAAAGTCTGCTGGCTGTACCAATTAGTTTTGTCAGCGAGCATATTGAAACTCTAGAAGAAATTGATGTAGAGTACAAAGAATTGGCTCTAAATTCTGGTATAGAAAAATGGGGTCGTGTTCCTGCTCTTGGAACTGAACCCACCTTCATTTCAGATTTGGCAGATGCCGTAATTGAGAGTCTCCCTTATGTTGGTGCAATGGCAGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCATTGGGCAGCGTAGAAGAGTTATTGGCAGCATATGATTCACAGCGGAGGGAGTTGCCACCACCGGTAATTGTGTGGGAATGGGGATGGACCAAAAGTGCTGAAACTTGGAATGGAAGAGCTGCTATGCTTGCTGTGCTTCTTCTGTTGTTTTTAGAAGTCACCACTGGTGAGGGATTTCTGCACCAGTGGGGGATATTGCCCTTGTTTAGGTGA 1593 0.4256 MNSPIHAPSPPSSSSCSYNGPPPCLSHGSRNFKSPLLLPQTIRTSQKMYRCSGGHVEASSNTNPLKNYVVGKSTSGWFETQSLVSEQLVKRRLLPLEALATPTVQDFSDTPLIGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFSFLQKPLAKFVSVLRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWAKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVKMQHTVIPSWYQREGYINAMANLIEKELKGFDCPEKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALNSGIEKWGRVPALGTEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDSQRRELPPPVIVWEWGWTKSAETWNGRAAMLAVLLLLFLEVTTGEGFLHQWGILPLFR 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00756 530 CDD Ferrochelatase_N 118 280 IPR033659 -
Viun3g00756 530 CDD Ferrochelatase_C 286 424 IPR033644 -
Viun3g00756 530 Gene3D - 117 440 - -
Viun3g00756 530 NCBIfam ferrochelatase 116 441 IPR001015 GO:0004325|GO:0006783
Viun3g00756 530 Hamap Coproporphyrin III ferrochelatase [cpfC]. 116 441 IPR001015 GO:0004325|GO:0006783
Viun3g00756 530 SUPERFAMILY Chlorophyll a-b binding protein 485 525 - -
Viun3g00756 530 FunFam Ferrochelatase 117 295 - -
Viun3g00756 530 PANTHER FERROCHELATASE 115 467 IPR001015 GO:0004325|GO:0006783
Viun3g00756 530 Pfam Ferrochelatase 117 440 IPR001015 GO:0004325|GO:0006783
Viun3g00756 530 Gene3D - 279 422 - -
Viun3g00756 530 SUPERFAMILY Chelatase 116 447 - -
Viun3g00756 530 ProSitePatterns Ferrochelatase signature. 307 328 IPR019772 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00756 Viun-Chr3 4670766 4676783 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00756 K01772 - gmx:100803481 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00756 3 4670766 4676783 Viun3g00756 3 4670766 4676783 ECH
Viun3g00756 3 4670766 4676783 Viun9g01661 9 25088365 25094582 PCT