Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00734 ATGGGAGGAGCTTCTGCAGATCTTCACCACCATGAATCAGACATAGAACTAACTGATGCTGAAAGGTCTGAGACAAACAACAACGCAGGAGGTTCAGAGTCAAAACATGGTACTGATGTTGAACTTGACAGTGGCAGAAAATCTGAGGCAGAAGCTGGTGAGGGTCACTATGTTGAGGTCACCATGGACATTCATGGTGATTCTGTGGCCTTACACAGTGTTAAAGATTTTGATGGGGTGGAAGAGGAGGATGAAAAGCTGGGTTTGACAGGGAAGAGGCTTGAGAAGAAAAAATCGTTTGGTGCCTCTGTGGTTCAGAGTGCTGCAATCCGCATGAAGCAGCTGAAGCGTTTGGCTTCTTTCTCAAAACCAGCACCGAAACACTTCGAAAGAACGAAGTCTGCAGTGGCTCATGCTCTCACAGGGCTCAAGTTCATCAGCATGACCGATGGGGGTGCAGGGTGGGATGAGGTGGAGAACCGGTTTCAGAAGCTCACTGCTAACTCTGATGGCTATCTTCCTCGTACTCTCTTTGCACAATGCTTAGGATTGAACAAGGAATCCGAGGCTTATGCAGAGAAGCTTTTTGATACTCTTGCTAGGCAGAGAGGTATTCAAGGGGGTTCCATTAACAAGATCCAGTTGAGGGAGTTCTGGGACAGTATTTCTGACCAGAGCTTTGATACCAGGCTCAAAACATTCTTTGACATGGTTGATAAAGATGCAGATGGAAGAATCACCGAGGAAGAAATTAAAGAGATTATCTGCCTTAGCGCCACTGCGAACAAACTGTCAAACATTCAGAAGCAAGCAGAGGAATATGCAGCTTTGATCATGGAAGAACTGGACCCTGATGACTCAGGATACATCATGATAGACAGCTTGGAAACACTTCTGTTGCATGCACCAGAGGAAACTACAAGAGGAGAAAGCAAGAACCTGAGTCAAATGCTAAGCCAAAAGCTTAAGCCAACGTATGTGGACAGTGTAATTTTGAGGTGGTACAGGGATGCCAAGTACTTTTTGCTGGACAATTGGCGAAGATCTTGGGTACTTGCCCTGTGGATTGGTGTGATGTTAGGCCTATTTGCCTATAAATTTGTGCAATATCGGAGAAGAGCTGTGTATGAGGTAATGGGCCATTGTGTATGCATGGCAAAAGGTGCAGCAGAGACTCTTAAATTGAACATGGCTCTCATCTTGTTACCTGTTTGCCGAAACACCATTACCTGGCTAAGAAACAAGACCAAACTTGGTGCTGTAGTTCCTTTCGACGACAACATCAACTTCCACAAGGTAATAGCTGTGGCAATAGCAATTGGTGTTGGTGTACATGCCATATATCATCTTACATGTGATTTTCCTCGGCTTCTTCATGCAAGTGATGAGAAGTACAAGCTGATGGAACCCTTTTTCGGAGAAAGACCTTCAGATTATTGGTATTTTGTGAAATCATGGGAAGGAGTAACAGGGATTGTAATGATAGTGCTGATGGCAATAGCTTTTACATTGGCCAATCCTGCATTCAGAAGAGGAAGAACCAAACTTCCCAAACCCTTCAACAAACTCACAGGTTTCAATGCCTTTTGGTATTCTCATCATCTCTTCGTTTTTGTCTATGCCCTGTTGGTTATTCATGGAATCAAACTTTACTTGACCAAGAAATGGTACAAGAAAACGACATGGATGTATCTAGCTGTTCCCATCACCATTTATGCATTGGAAAGACTGATTAGAGCACTCAGATCAAGTATTAAGTCTGTCAAAATATTGAAGGTGACTCTTTATCCTGGAAATGTGTTATCACTTCAAATGTCAAAACCTCAGGGATTTACCTACAAAAGTGGACAATACATGTTTGTGAATTGTGCTGCTGTGTCTCCATTTGAATGGCATCCATTTTCCATAACTTCAGCCCCTGATGATGATTACCTAAGCGTTCACATCAAAATTCTTGGTGATTGGACCCGAAGTCTGAAAACCAAATTCTCGCAGGCATGCCAACAACCCCTCAATGGACAGAGTGGACTTCTAAGAGCAGAATGCTTGAAAGGAGATAACAGTTCAATAAATTTCCCGAAGGTTCTGGTGGATGGACCATACGGGGCTCCGGCACAGGACTACAAGGAGTACGAGGTGGTTCTGCTGGTGGGGTTAGGAATAGGGGCTACCCCAATGATAAGTATTCTGAAGGACATGGTGAAGAGGTTGAAGGGGATAGAGGAGGAGGAAGTGGAGGAGGGAGCGGTGGCGAAGAGTGGTGATGAGTTCAAGACAAGGAGAGCATATTTCTACTGGGTGACGAGAGAGCAGGGTTCGTTCGACTGGTTCAAAGGGGTGATGAACGAGGTGGCGGAAGAGGATCGAAGGAAGGTGATAGAACTCCATAGCTACTGCACCAGCGTGTACGAAGAAGGTGATGCTCGTTCTGCTCTCATTGCGATGTTGCAATCGATCAACCATGCGAAGAATGGCCTTGACATTGTCTCTGGAACTCGCGTCATGTCTCACTTTGCCAAACCCAATTGGCGCACAGTTTACAAACGCATAGCCCTTAATCATCCACATGCTCGTGTTGGGGTGTTTTACTGTGGGCCATCGGCTCTGACCCATGAGCTTCGCCAGCTTGCGTTGGATTTCTCTCACAACACATCCACCAAGTATGATTTCCACAAAGAGAATTTCTGA 2688 0.4509 MGGASADLHHHESDIELTDAERSETNNNAGGSESKHGTDVELDSGRKSEAEAGEGHYVEVTMDIHGDSVALHSVKDFDGVEEEDEKLGLTGKRLEKKKSFGASVVQSAAIRMKQLKRLASFSKPAPKHFERTKSAVAHALTGLKFISMTDGGAGWDEVENRFQKLTANSDGYLPRTLFAQCLGLNKESEAYAEKLFDTLARQRGIQGGSINKIQLREFWDSISDQSFDTRLKTFFDMVDKDADGRITEEEIKEIICLSATANKLSNIQKQAEEYAALIMEELDPDDSGYIMIDSLETLLLHAPEETTRGESKNLSQMLSQKLKPTYVDSVILRWYRDAKYFLLDNWRRSWVLALWIGVMLGLFAYKFVQYRRRAVYEVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWLRNKTKLGAVVPFDDNINFHKVIAVAIAIGVGVHAIYHLTCDFPRLLHASDEKYKLMEPFFGERPSDYWYFVKSWEGVTGIVMIVLMAIAFTLANPAFRRGRTKLPKPFNKLTGFNAFWYSHHLFVFVYALLVIHGIKLYLTKKWYKKTTWMYLAVPITIYALERLIRALRSSIKSVKILKVTLYPGNVLSLQMSKPQGFTYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIKILGDWTRSLKTKFSQACQQPLNGQSGLLRAECLKGDNSSINFPKVLVDGPYGAPAQDYKEYEVVLLVGLGIGATPMISILKDMVKRLKGIEEEEVEEGAVAKSGDEFKTRRAYFYWVTREQGSFDWFKGVMNEVAEEDRRKVIELHSYCTSVYEEGDARSALIAMLQSINHAKNGLDIVSGTRVMSHFAKPNWRTVYKRIALNHPHARVGVFYCGPSALTHELRQLALDFSHNTSTKYDFHKENF 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00734 895 Pfam Ferric reductase like transmembrane component 388 544 IPR013130 -
Viun3g00734 895 Pfam Respiratory burst NADPH oxidase 129 229 IPR013623 GO:0004601|GO:0050664
Viun3g00734 895 SFLD Ferric reductase subgroup (FRE) 324 895 - -
Viun3g00734 895 SFLD NADPH oxidase subgroup (NOX) 108 895 - -
Viun3g00734 895 Pfam Ferric reductase NAD binding domain 711 877 IPR013121 GO:0016491
Viun3g00734 895 FunFam Respiratory burst oxidase protein A 702 895 - -
Viun3g00734 895 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 708 895 IPR039261 -
Viun3g00734 895 Pfam FAD-binding domain 586 704 IPR013112 GO:0016491
Viun3g00734 895 Gene3D - 702 895 IPR039261 -
Viun3g00734 895 PRINTS Cytochrome B-245 heavy chain signature 526 546 IPR000778 GO:0016020|GO:0016491
Viun3g00734 895 PRINTS Cytochrome B-245 heavy chain signature 716 733 IPR000778 GO:0016020|GO:0016491
Viun3g00734 895 PRINTS Cytochrome B-245 heavy chain signature 434 452 IPR000778 GO:0016020|GO:0016491
Viun3g00734 895 PRINTS Cytochrome B-245 heavy chain signature 693 706 IPR000778 GO:0016020|GO:0016491
Viun3g00734 895 SUPERFAMILY Riboflavin synthase domain-like 587 703 IPR017938 -
Viun3g00734 895 CDD NOX_Duox_like_FAD_NADP 590 895 - -
Viun3g00734 895 Gene3D Translation factors 574 675 - -
Viun3g00734 895 MobiDBLite consensus disorder prediction 1 53 - -
Viun3g00734 895 MobiDBLite consensus disorder prediction 7 21 - -
Viun3g00734 895 FunFam Respiratory burst oxidase homolog A 574 666 - -
Viun3g00734 895 PANTHER NADPH OXIDASE 191 895 - -
Viun3g00734 895 MobiDBLite consensus disorder prediction 36 53 - -
Viun3g00734 895 FunFam Respiratory burst oxidase homolog A 129 247 - -
Viun3g00734 895 ProSitePatterns EF-hand calcium-binding domain. 239 251 IPR018247 -
Viun3g00734 895 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 578 707 IPR017927 GO:0016491
Viun3g00734 895 ProSiteProfiles EF-hand calcium-binding domain profile. 226 261 IPR002048 GO:0005509
Viun3g00734 895 Gene3D - 129 247 - -
Viun3g00734 895 SUPERFAMILY EF-hand 155 303 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00734 Viun-Chr3 4474699 4479736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00734 57 895 Miscellaneous Gene Families AT5G51060 65.658 0.0 1165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00734 K13447 - gmx:100808271 1571.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00734 3 4474699 4479736 Viun3g00734 3 4474699 4479736 ECH